Equus caballus (horse): 100052113
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Entry
100052113 CDS
T01058
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100052113 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100052113 (POLR1B)
Enzymes [BR:
ecb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100052113 (POLR1B)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100052113 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100052113
NCBI-ProteinID:
XP_001495511
Ensembl:
ENSECAG00000010062
VGNC:
21669
LinkDB
All DBs
Position
15:16126612..16156768
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPDGRWRNLPSGPTLKHLTDPLYGIPQEQQKPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGSICKDLSIYPAECRGRRSTYRGKLTADISW
SVNGIPKGIIKQFLGYVPIMVKSKLCNLYNLPPRALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIALTRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFVY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVTEEGCSTQKQV
LNYLGERFRVKLNLPDWYPDAQAAEFLFNQCICIHLKSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTDVSINTDNLMKIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFAYTASVPALLCSLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPSIADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGREELIGTMEQIFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYRDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRIVQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGESFVMY
YKSKENCIVDNIKVCSNDTGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacggccggtggcggaacctgcccagcgggcctaccctgaagcatttgacg
gaccccttgtatgggatcccgcaggagcagcaaaagccagcgttgcaggagctgacgcgg
gctcatgtcgagtctttcaactacgctgtgcgcgaggggctgagccacgcggtgcaggct
ataccaccctttgaatttgctttcaaagatgagcgtatctctcttactattgtggatgct
gtcatcagtccacccaccgttccaaaggggagcatctgcaaagatctcagcatttatcca
gcagaatgccggggccgaaggagtacctaccggggaaagttgacagctgatatcagctgg
tcagtgaatggaatcccaaaaggcatcattaagcagtttcttggctatgttcccatcatg
gtgaagtctaagctttgcaacttatacaaccttcctcccagagccctcatcgagcaccac
gaagaagcagaggaaatgggaggctattttatcatcaatggcattgaaaaagtcatccga
atgttgatcatgcctcggagaaatttccccattgcattgacaagaccaaaatggaaaacc
agagggcctggctatactcagtatggagtttcaatgcactgtgtgagggaagaacattct
gctgtcaatatgaaccttcactacttggaaaatggcacagttatgttgaactttgtttac
cggaaagaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaagaggatgactctttcttcaggaac
tctgtttcccagatgttaaggattgtaacagaagagggttgttccacacaaaaacaggtc
cttaactatctaggtgaacgcttcagagtaaaactcaaccttcctgactggtatccggat
gcacaggctgcggagtttctgtttaaccagtgcatttgtatccacttgaaatccaatact
gaaaagttttatgtactttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttagtgaatcaagaggtcctcacacccggtcagctc
ttcctcatgtttctcaaggaaaaaatggaagcttggttagtatctattaaaatagctcta
gacaagaaggctcagaagaccgatgtgtccataaacactgacaatttgatgaagattttt
aatctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tctaaaacaggtcttggcttcctgcaagattctggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggcagattttgccaag
atgaggaccaccacagtacgcaggctgctgccggagtcctggggtttcctttgtcctgtg
cacaccccagacggggagccctgtggtctgatgaaccacctaactgccatatgtgaggtc
gtcacgcagtttgcgtatacagcatctgttccagccttgctctgcagcttgggggtcact
ccagttgatggggcgccgcaccgaccgtacagtgagtgctaccctgtcctgctggatggc
gtcatggtgggctgggtggacaaggagctcgctcccagcattgcggattctctccgacat
tttaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctcatccccatg
acaggaaaaccaagtctgtacccaggattgttccttttcaccaccccgtgtagactggta
cggcctgtgcagaacttggagttgggcagagaagagctaattggaaccatggaacagatc
ttcatgaacattgctatcttcgaggatgaggtttttgctggagttaccacccaccaggaa
ctcttccctcacagcctgctgagtgtgattgccaacttcatccctttctccgatcacaac
cagagtcctcggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
cttacttatcgagaccgatcagataataaactgtatcgtcttcagactccacaaagccct
ttagtgagaccatacatgtatgattattatgacatggataactatccaattgggacgaat
gctattgttgctgttatttcctacactggctatgatatggaagatgccatgattgtaaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgagttcatagat
ctctctgaaaaaattaaacaaggagatgacagtctggtgtttggagtcaaacctggtgac
ccacggattgtgcagaagttagacgacgatggcttgccatttattggagcacaactgcag
tatggagatccgtattacagctacctgaacctcaacactggagagagctttgtgatgtac
tacaagagtaaagaaaattgtattgtggataacatcaaagtgtgcagtaacgacactgga
agtggaaaattcaagtgtatttgcatcacaatgagagtccctcggaacccaaccatcgga
gataaatttgccagtcgtcatgggcaaaaaggcatcttgagcagattgtggccagctgag
gacatgccctttactgagagtgggatggtcccagacattctcttcaatcctcatggtttt
ccatcccgaatgaccatcggtatgttaatcgagagtatggcagggaagtctgcagctttg
catggtctctgccatgatgctacacccttcatcttttcagaggagaactcggccttagaa
tactttggtgagatgttaaaggctgctggctacaacttctatggcaccgagaggttgtat
agtggcatcagtggggtagaactggaagcagacattttcataggtgtggtttattatcaa
cgcctgcgccacatggtctcagacaaattccaggttagaacaacgggagccagagacaaa
gtcactaaccagcctattgggggaagaaatgtccagggtggaatccgttttggggaaatg
gaacgggatgctcttttagctcatggtacctcttttctccttcatgaccgcctcttcaac
tgttctgatcgatcggtagcccacgtgtgtgtgaagtgtggtagtttactgtctcctctg
ttggagaagccacccccttcgtggtctgccatgcgcaacagaaaatacaactgtactctg
tgtaatcgcagtgacactatcgacactgtttctgtgccttacgtttttcggtattttgta
gctgagctggcagctatgaacatcaaagtgaaactggatgtcatttaa
DBGET
integrated database retrieval system
