Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_0196
Help
Entry
ECH74115_0196 CDS
T00778
Symbol
ldcC1
Name
(GenBank) lysine decarboxylase, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf00310
Lysine degradation
ecf01100
Metabolic pathways
ecf01110
Biosynthesis of secondary metabolites
ecf01120
Microbial metabolism in diverse environments
Module
ecf_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
ECH74115_0196 (ldcC1)
Enzymes [BR:
ecf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
ECH74115_0196 (ldcC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACI39619
LinkDB
All DBs
Position
213003..215144
Genome browser
AA seq
713 aa
AA seq
DB search
MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALCFFEYALGQAEDIAIRMRQY
TDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgaacataaccctcgaatttgcggcgtgatttttgactgggat
gaatacagtctcgatttatgtagcgatatcaatcagcttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tgtttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accgacgaatatcttgataacattaccccaccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccgggtcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgactttttcggcgggaatacccttaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggactttcggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatt
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggtgggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgccaccacgcaggcacaatggccggttcat
gcggtgattaccaactcaacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtacacccattttcat
ccgatctaccaggggaaaagtggtatgagcggcgagcgtgttgcgggaaaagtgatcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcgctgatccacatt
aaaggtgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttgagacggcagcagcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcagtagaacgagctctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgcctggcgaacaatggcacggctttaacgatgcggat
gccgatcatatgttcctcgatccggttaaagtcactattctgacgccggggatggacgag
cagggcaatatgagcgaggaggggatcccggcggcgctggtggcgaagttcctcgatgag
cgtgggatcgtggtagagaaaaccggcccatataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaaacgctcttac
gatctcaatctgcgaatcaaaaatatgcttccggatctgtacgcagaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcattcgatactttgccggagatgatcatgacgcca
catcaggcatggcagagacagattaaaggtgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
cctggagaaatgctgaccaaagagagccgcacagtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggtgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
DBGET
integrated database retrieval system
