Enterobacter chengduensis: FY206_13590
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Entry
FY206_13590 CDS
T06229
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
echg
Enterobacter chengduensis
Pathway
echg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FY206_13590 (pdeR)
Enzymes [BR:
echg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
FY206_13590 (pdeR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Pro-rich_19
Motif
Other DBs
NCBI-ProteinID:
QEL36391
UniProt:
A0A5C1C0R4
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All DBs
Position
2793377..2795368
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AA seq
663 aa
AA seq
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MMDDLEQNLLFRYMGTHSPWWRLSADSNALHLAASENADVTQVIALDDKQADLIRHLTVI
TSSISMTLSLFGEDLPVHLVGRKITRNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDQNGNIQRFNRLSEEYTGLKEHEVIGQNVFKLFMSRSEVAASKRNISGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHDLISDAIANRGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEDQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVYSPEMNQRVFEYLWLDTNLRKALDND
QLLIHYQPKITWRGEIRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPVDVELTESCLIENE
ELALSVIQQFSKLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVKDIHKQSISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQAR
NQR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatctggagcagaacttgctgtttcgctacatgggtactcacagcccgtgg
tggcgcttgtcagctgacagcaacgctctgcaccttgccgccagtgaaaatgccgacgtc
actcaggtgattgcgctggacgataaacaggccgatctcatccgtcacttaaccgttatt
acctccagcatttctatgacgctctcgctattcggggaagatcttccggttcaccttgtt
ggacgtaaaattacccgcaacgagtgggccggaaccgcttccgcctggaacgataccccc
tccgtggcgcgcgacctagcacaggggctctctttcgcggagcaggttgtctcagaggcc
aactccgtcattgttattctcgatcagaacggcaatattcagcgtttcaaccggcttagc
gaagagtacaccggcctgaaagagcatgaggtgattggccagaacgtatttaagctgttt
atgagccgcagcgaagtggctgcgtcaaaacgcaatattagcggtttctttcgcaacggc
agctcctacgaagtcgaacgctggatcaaaacgcgcaaagggcagcggctgtttctgttc
agaaacaagttcgttcacagcggcagtggaaaaaatgaaattttccttatctgttccggg
accgatattaccgaggagcgccgcgctcaggagcggctgcgcgtgctggccaacaccgat
accatcaccggcctgccgaaccgtaatgcgatccacgacctgatttctgacgccattgct
aaccgcggcgatacccaggtgggcgtggtgtatctcgatctggataattttaaaaaggtt
aacgacgcttacgggcatatgtttggcgatcagctgttacaggcggtcgccctcgccatc
ctgagctgtctggatgaggaccaggtgctggcacggcttggcggtgatgagtttatcgtc
atggccaccaatacctctcagggctctctggaggcgatggcatcacgcattttaacccgt
ctgcgccagccgttccgaatcggtctgattgaaatttataccggctgctccctgggtatc
gccctcgctccgcagcacggcaacgatcgggaaagcgtgattcgtaacgccgataccgcg
atgtataccgccaaagagaacggccggggcaagttctgcgtttactcgcccgagatgaac
cagcgcgtgttcgagtatctctggctggataccaacctgcgtaaggccctggataacgat
cagcttctgatccactatcagccgaaaatcacctggcgcggggaaatcagaagcctcgaa
gcgctggtccgctggcaatcccccgagcgcggcctgattccgccgctggagtttatctct
tatgccgaggagtcggggttgattgtgccgctgggccgctgggtgatgctcgacgtggtt
cgccaggtggctaaatggcgcgataagggcataaacctgcgcgtggccgtcaacgtctct
gctcgccagctggccgatcagaccatcttcagcgacttaaagcaggcgctgaaggatctg
aattttgaatactgccccgtcgacgttgaattaacggaaagctgtcttattgagaacgaa
gagctggcgctgtccgtgatccagcagttcagcaagctcggggcgcagattcatctggat
gattttggcaccggctactcctccctttcgcagctggcgcgcttccctatcgacgctatt
aagctcgatcaatccttcgtcaaggatattcataagcagtcgatttcgcagtcgctggtg
cgcgctatcgtcgcggtggcgcaggcgttaaatctgcaggtgattgccgaaggcgtggaa
agtgcaaaagaagacgcctttctgaccaagaacggcgtcaacgaacggcagggttttctg
tttgcgaagccgatgcccgctgccgcattcgagcgatggctaaaacgatatcaagcgcgg
aatcaacgttag
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