Escherichia coli K-12 W3110: JW2486
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Entry
JW2486 CDS
T00068
Symbol
ppk
Name
(GenBank) polyphosphate kinase, component of RNA degradosome
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00190
Oxidative phosphorylation
ecj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JW2486 (ppk)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JW2486 (ppk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecj03019
]
JW2486 (ppk)
Enzymes [BR:
ecj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JW2486 (ppk)
Messenger RNA biogenesis [BR:
ecj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JW2486 (ppk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BAA16389
UniProt:
P0A7B1
Structure
PDB
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All DBs
Position
2621700..2623766
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AA seq
688 aa
AA seq
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MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR
IIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQ
NWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVP
RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME
ASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDF
INFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQA
SFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTE
AGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARI
TNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNL
VDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFEN
GGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSN
RYVPRGNRRKVRAQLAIYDYIKSLEQPE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaaagctatacatcgaaaaagagctcagttggttatcgttcaatgaacgc
gtgcttcaggaagcggcggacaaatctaacccgctgattgaaaggatgcgtttcctgggg
atctattccaataaccttgatgagttctataaagtccgcttcgctgaactgaagcgacgc
atcattattagcgaagaacaaggctccaactctcattcccgccatttactgggcaaaatt
cagtcccgggtgctgaaagccgatcaggaattcgacggcctctacaacgagctattgctg
gagatggcgcgcaaccagatcttcctgattaatgaacgccagctctccgtcaatcaacaa
aactggctgcgtcattattttaagcagtatctgcgtcagcacattacgccgattttaatc
aatcctgacactgacttagtgcagttcctgaaagatgattacacctatctggcggtggaa
attatccgtggcgataccatccgttacgcgctgctggagatcccatcagataaagtgccg
cgctttgtgaatttaccgccagaagcgccgcgtcgacgcaagccgatgattcttctggat
aacattctgcgttactgccttgatgatattttcaaaggcttctttgattatgacgcgctg
aatgcctattcaatgaagatgacccgcgatgccgaatacgatttagtgcatgagatggaa
gccagcctgatggagttgatgtcttccagtctcaagcagcgtttaactgctgagccggtg
cgttttgtttatcagcgcgatatgcccaatgcgctggttgaagtgttacgcgaaaaactg
actatttcccgctacgactccatcgtccccggcggtcgttatcataattttaaagacttt
attaatttccccaatgtcggcaaagccaatctggtgaacaaaccactgccgcgtttacgc
catatttggtttgataaagcccagttccgcaatggttttgatgccattcgcgaacgcgat
gtgttgctctattatccttatcacacctttgagcatgtgctggaactgctgcgtcaggct
tcgttcgacccgagcgtactggcgattaaaattaacatttaccgcgtggcgaaagattca
cgcatcatcgactcgatgatccacgccgcacataacggtaagaaagtcaccgtggtggtt
gagttacaggcgcgtttcgacgaagaagccaacattcactgggcgaagcgcctgaccgaa
gcaggcgtgcacgttatcttctctgcgccggggctgaaaattcacgccaaactgttcctg
atttcacgtaaagaaaacggtgaagtggtgcgttatgcacacatcgggaccgggaacttt
aacgaaaaaaccgcgcgtctttatactgactattcgttgctgaccgccgatgcgcgcatc
accaacgaagtacggcgggtatttaactttattgaaaacccataccgtccggtgacattt
gattatttaatggtatcgccgcaaaactcccgccgcctattgtatgaaatggtggaccgc
gagatcgccaacgcgcagcaagggctgcccagtggtatcaccctgaagctaaataacctt
gtcgataaaggcctggttgatcgtctgtatgcggcctccagctccggcgtaccggttaat
ctgctggttcgcggaatgtgttcgctgatccccaatctggaaggcattagcgacaacatt
cgtgccatcagtattgttgaccgttaccttgaacatgaccgggtttatatttttgaaaat
ggcggcgataaaaaggtctacctttcttccgccgactggatgacgcgcaatattgattat
cgtattgaagtggcgacgccgctgctcgatccgcgcctgaagcagcgggtactggacatc
atcgacatattgttcagcgatacggtcaaagcacgttatatcgataaagaactcagtaat
cgctacgttccccgcggcaatcgccgcaaagtacgggcgcagttggcgatttatgactac
atcaaatcactcgaacaacctgaataa
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