Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4409
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Entry
ECRM13516_4409 CDS
T03011
Symbol
rfaF
Name
(GenBank) ADP-heptose--lipooligosaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00540
Lipopolysaccharide biosynthesis
ecoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECRM13516_4409 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
ECRM13516_4409 (rfaF)
Enzymes [BR:
ecoh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
ECRM13516_4409 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
Core region
ECRM13516_4409 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PolyA_pol_RNAbd
PAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AHG17026
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All DBs
Position
4370431..4371477
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AA seq
348 aa
AA seq
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MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG
HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV
RVLDKEAWPLMVERYVALAYDKGVMRTAQDLPKPLLWPQLQVSEGEKSYTCNQFSLSSER
PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQ
AWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH
KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactggtgatcggcccgtcttgggttggcgacatgatgatgtcgcaaagtctc
tatcgcacgctccaggcgcgctatccccaggcgataatcgatgtgatggcaccggcatgg
tgccgtccattattatcgcggatgccggaagttaacgaagctattcctatgcctctcggt
cacggagcgctggaaatcggcgaacgccgcaaactgggtcatagcctgcgtgaaaagcgc
tacgaccgcgcctacgtcttacccaactccttcaaatctgcattagtgcctttcttcgcg
ggtattcctcatcgcaccggctggcgcggcgagatgcgctacggtttactcaacgatgta
cgcgtgctcgataaagaagcctggccgctaatggtggaacgctatgtcgcgctggcctat
gacaaaggcgtgatgcgtaccgcacaagatctaccaaaaccgttgttatggccgcaattg
caggtgagcgaaggtgaaaaatcatatacctgtaatcaattttcgctttcatcagaacgt
ccgatgattggtttttgcccgggtgcggagtttggtccggcaaaacgctggccacactac
cactatgcggaactggcaaagcagctgattgatgaaggttatcaggtggttctgtttggc
tctgcgaaagatcatgaagcgggcaatgagattcttgccgctttgaataccgagcagcag
gcatggtgtcggaacctggcgggggaaacacagcttgatcaagcggttatcctgattgca
gcctgtaaagccattgtcactaacgattctggcctgatgcatgttgcggcggcgctcaat
cgtccgctggttgccctgtatggtccgagtagcccggacttcacaccgccgctatcccat
aaagcgcgcgtgatccgcctgattaccggctatcacaaagtgcgtaaaggtgacgctgcg
gagggttatcaccagagcttgatcgacattactccccagcgcgtactggaagaactcaac
gcgctattgttacaagaggaagcctga
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