Escherichia coli K-12 MDS42: ECMDS42_3281
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Entry
ECMDS42_3281 CDS
T02541
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
ecok
Escherichia coli K-12 MDS42
Pathway
ecok00130
Ubiquinone and other terpenoid-quinone biosynthesis
ecok01100
Metabolic pathways
ecok01110
Biosynthesis of secondary metabolites
ecok01240
Biosynthesis of cofactors
Module
ecok_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
ecok00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
ECMDS42_3281 (ubiD)
Enzymes [BR:
ecok01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
ECMDS42_3281 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
BAL40420
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Position
3454201..3455694
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AA seq
497 aa
AA seq
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MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSM
PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM
PTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYR
QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDS
FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAH
IDAIWDELAIFNNGKSA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatgaaatataacgatttacgcgacttcttgacgctgcttgaacagcagggt
gagctaaaacgtatcacgctcccggtggatccgcatctggaaatcactgaaattgctgac
cgcactttgcgtgccggtgggcctgcgctgttgttcgaaaaccctaaaggctactcaatg
ccggtgctgtgcaacctgttcggtacgccaaagcgcgtggcgatgggcatggggcaggaa
gatgtttcggcgctgcgtgaagttggtaaattattggcgtttctgaaagagccggagccg
ccaaaaggtttccgcgacctgtttgataaactgccgcagtttaagcaagtattgaacatg
ccgacaaagcggctgcgtggtgcgccctgccaacaaaaaatcgtctctggcgatgacgtc
gatctcaatcgcattcccattatgacctgctggccggaagatgccgcgccgctgattacc
tgggggctgacagtgacgcgcggcccacataaagagcggcagaatctgggcatttatcgc
cagcagctgattggtaaaaacaaactgattatgcgctggctgtcgcatcgcggcggcgcg
ctggattatcaggagtggtgtgcggcgcatccgggcgaacgtttcccggtttctgtggcg
ctgggtgccgatcccgccacgattctcggtgcagtcactcccgttccggatacgctttca
gagtatgcgtttgccggattgctacgtggcaccaagaccgaagtggtgaagtgtatctcc
aatgatcttgaagtgcccgccagtgcggagattgtgctggaagggtatatcgaacaaggc
gaaactgcgccggaagggccgtatggcgaccacaccggttactataatgaagtcgatagt
ttcccggtatttaccgtgacgcatattacccagcgtgaagatgcgatttaccattccacc
tataccgggcgtccgccagatgagcccgcggtgctgggtgtcgcactgaacgaagtgttt
gtgccgattctgcaaaaacagttcccggaaattgtcgatttttacctgccgccggaaggc
tgctcttatcgcctggcggtagtgacaatcaaaaaacagtacgccggacacgcgaagcgc
gtcatgatgggcgtctggtcgttcttacgccagtttatgtacactaaatttgtgatcgtt
tgcgatgatgacgttaacgcacgcgactggaacgatgtgatttgggcgattaccacccgt
atggacccggcgcgggatactgttctggtagaaaatacgcctattgattatctggatttt
gcctcgcctgtctccgggctgggttcaaaaatggggctggatgccacgaataaatggccg
ggggaaacccagcgtgaatggggacgtcccatcaaaaaagatccagatgttgtcgcgcat
attgacgccatctgggatgaactggctatttttaacaacggtaaaagcgcctga
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