Escherichia coli LY180: LY180_01960
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Entry
LY180_01960 CDS
T02846
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K13244
c-di-GMP-specific phosphodiesterase [EC:
3.1.4.52
]
Organism
ecol
Escherichia coli LY180
Brite
KEGG Orthology (KO) [BR:
ecol00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LY180_01960
Enzymes [BR:
ecol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LY180_01960
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Motif
Pfam:
EAL
GerE
HTH_38
HTH_40
Hom_end
IMPDH
HTH_23
Motif
Other DBs
NCBI-GeneID:
16978067
NCBI-ProteinID:
AGW07784
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Position
408686..409774
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AA seq
362 aa
AA seq
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MASHDLSVFLEEFGATVNLTLPGIVSEKERLLLKLLMEGMSVTEISQYRNRSAKTISHQK
KQLYEKLGIQSDITFWRDIFFQYHPQVISGTGNKNNFYIPDNRCHHIVTPEAISLALENH
EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQT
ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIP
VTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH
IVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKA
GG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcatgatttgagtgtttttttggaagagttcggggcaacggtgaatttgacg
ttgcctggtatcgtgtccgaaaaagaacggcttttactcaagctgctaatggagggaatg
tcggttacagaaatctcacagtacagaaatcgcagtgcaaagacaatttcacatcaaaag
aagcagctgtatgaaaaactaggcatccagagtgatattaccttctggcgggatatcttt
tttcaatatcatccgcaagtcatcagtggcacgggaaataaaaataatttttatatccct
gataaccgttgtcaccatatcgtcacgcctgaagccatcagtctggcgttggaaaaccac
gaattcaaaccgtggatccaaccggttttctgcgcgcagactggggtactgacgggctgt
gaggtacttgtccgctgggaacatccacaaacgggaattatcccaccggatcagtttatt
cctctggcggagtcatccggtcttattgtcataatgacccgccaactgatgaaacagact
gcggatattctgatgccggtaaaacatttgctgccggacaatttccatattggcatcaac
gtctcggcgggttgttttttggcagcgggatttgaaaaagagtgtctgaacctggttaag
aaattaggtaacgataaaatcaagctggttctcgagctaacggaacgtaaccctattccg
gtaacgccagaagccagagcgatatttgacagccttcatcagcacaacattacctttgcg
ctggatgactttggtacgggttatgcgacctatcgttacttgcaggcgttcccggtcgat
tttattaagatcgataagtcatttgtgcaaatggcgagtgtcgacgaaatctccggtcat
attgtggacaatattgtcgaactagcgcgtaagcctggtctgagtatcgtggcggaaggg
gtagaaacccaggagcaggcggatttaatgatcggtaaaggcgttcactttttgcagggc
tatttgtactctccgccagtaccgggtaataaatttatctctgaatgggtaatgaaagca
ggtggttga
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