Eikenella corrodens: SAMEA4412678_1128
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Entry
SAMEA4412678_1128 CDS
T05039
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ecor
Eikenella corrodens
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecor03009
]
SAMEA4412678_1128 (rsmD)
Enzymes [BR:
ecor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SAMEA4412678_1128 (rsmD)
Ribosome biogenesis [BR:
ecor03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMEA4412678_1128 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
Met_10
MethyltransfD12
SAM_MT
Methyltransf_24
TRM
RsmJ
PrmA
UPF0020
Methyltransf_15
RrnaAD
Spermine_synth
N6_N4_Mtase
Methyltrans_SAM
BpsA_C
N6-adenineMlase
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
SNW08628
UniProt:
A0A1A9RGN6
LinkDB
All DBs
Position
1:1129462..1130028
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AA seq
188 aa
AA seq
DB search
MQKQNKHNKHKNQIRIIGGELRGRKVRFADAEGLRPTADSVRERLFNWLGQDLTGQVVLD
LFAGSGALGFEAASRGAKRVVLVENNRRTAASLQQQIQELRLPERMKVESMDSFVFLEKT
QEQFDVVFLDPPFAWQRWVELFMCLEQRLHSGAYIYAEAGDLPVWPDYLLELNAGQSGLS
KYALLKKK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacaaaataagcacaataaacacaaaaatcaaatccgtattattggtggggag
ctgcgcgggcggaaagttcggtttgctgatgcagaaggcttgcgcccaaccgcagatagt
gtgcgggagcgtttatttaactggttgggacaggatttaaccggtcaagtggtgttggat
ttgtttgctggtagcggagccttgggttttgaggctgcctcgcgaggggcgaaacgggtt
gtgttggtagaaaataatcggcggactgctgcaagtttacaacagcaaatacaagaattg
aggctacctgaaagaatgaaggttgaatccatggattcttttgtgtttttagaaaaaaca
caagagcaatttgatgtggtgtttttggatccaccatttgcttggcagagatgggttgag
ctttttatgtgcttggagcagcgtttgcatagtggtgcatatatatatgctgaagcagga
gacttgcctgtttggcctgattatctgttggagttgaatgccgggcaatcaggattaagt
aaatatgcgctgctcaagaagaaatga
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