Escherichia coli O81 ED1a (commensal): ECED1_3855
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Entry
ECED1_3855 CDS
T00827
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq00540
Lipopolysaccharide biosynthesis
ecq01100
Metabolic pathways
ecq01250
Biosynthesis of nucleotide sugars
Module
ecq_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECED1_3855 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecq01005
]
ECED1_3855 (kdsD)
Enzymes [BR:
ecq01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
ECED1_3855 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
ecq01005
]
Lipid A
ECED1_3855 (kdsD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
CAR09858
UniProt:
B7N0J0
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All DBs
Position
3783811..3784797
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AA seq
328 aa
AA seq
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MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS
GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK
RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK
ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT
VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR
HITSVMVADGDHLLGVLHMHDLLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgtagagttacaaccgggttttgactttcagcaagcaggtaaagaagtcctg
gcgattgaacgtgaatgcctggcggagcttgatcaatacatcaatcagaatttcacgctt
gcctgtgaaaagatgttctggtgtaaagggaaagttgtcgtcatgggaatgggcaaatcg
gggcacatcgggcgcaaaatggcagcaacatttgccagcaccggtacaccttcatttttc
gtccatcctggcgaagccgcgcatggtgatttaggcatggtcaccccacaggatgtggtg
attgctatctctaactcaggtgaatccagcgaaatcacggccttaattccagtgcttaag
cgtcttcacgtaccgttaatctgcatcaccggtcgcccggagagcagcatggcgcgcgcc
gcagatgtgcatctgtgtgttaaagtggcgaaagaagcctgtccgttagggctggcaccg
accagcagcacaaccgccacgctggttatgggcgatgccctcgctgtcgcgctgttaaaa
gcacgcggctttactgctgaagattttgcgctctcacacccaggcggcgcactgggtcgt
aaacttctgctgcgcgtaaacgatattatgcatacgggcgatgagatcccgcatgttaag
aaaacggccagtctgcgtgacgcattgctggaagttacccgcaaaaatcttggtatgact
gtcatttgcgatgacaatatgatgattgaaggcatctttaccgacggtgatttacgccgt
gtcttcgatatgggcgtggatgttcgtcagttaagtattgccgatgtgatgacgccgggg
ggaatacgcgtgcgcccaggcattctggccgttgaggcactgaacttaatgcagtcccgc
catatcacctccgtgatggttgccgatggcgaccatttactcggtgtgttacatatgcat
gatttactgcgtgcaggcgtagtgtaa
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