Etheostoma cragini (Arkansas darter): 117935028
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Entry
117935028 CDS
T07493
Symbol
htr2cl1
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1
KO
K04157
5-hydroxytryptamine receptor 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04080
Neuroactive ligand-receptor interaction
ecra04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117935028 (htr2cl1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117935028 (htr2cl1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
117935028 (htr2cl1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ecra04030
]
117935028 (htr2cl1)
G protein-coupled receptors [BR:
ecra04030
]
Rhodopsin family
Biogenic amine
Serotonin
117935028 (htr2cl1)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
117935028
NCBI-ProteinID:
XP_034713033
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All DBs
Position
19:3762325..3884706
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AA seq
579 aa
AA seq
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MGGPARALLGGFSTTTSSLEVGGQMAWPTNNPLDLNQTLSWGIGFGGSIGGAAAMSAGLD
NFTHESVTRKGMKEKNWPALLILVIIALTIGGNILVILAVSLEKKLQNATNFFLRSLAVA
DMLVGILVMPVSLINILYDYAWPLPSALCPIWIYLDVLFSTASIMHLCAISLDRYVAIRN
PIEHSRFNSRTKAMMKIAAVWTISIGVSMPIPVIGLHNEDKVFVNGSCVLNEERFMLIGS
FVAFFIPLVIMVVTYCLTIQVLQRQATVFLCERKSSSQQPLHTPAMTNTLQPPPNTFHVP
QITLAASDSPELKAPPPQSRRNTLSCLKGAEPSMLLSTSKSDSISIIPSSEMASQLSSPA
AGPGRSDTSGCHGRRGMMQAIKNERRASKVLGIVFFLFLIMWCPFFITNVTFVLCRGSCN
ESLLNDLLNVFVWVGYISSGVNPLVYTLFNKTYRRAFSSYIRCQYNVGANAAGPGCKTLL
VPPPCSSHAVTPLLMGSHGKAGMDRNSNCRNGGRGDNGRLTVDPDDMTDDETQIGIVSHS
FSECHNIDMLSETEPETEVKQELSLISYSPTSIEHTSSV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcccagctagggctcttcttggcgggttcagcaccaccacttcttccctggag
gttggaggtcagatggcttggccaaccaacaatcccctggacctcaaccagaccctgtca
tgggggatcgggtttggaggcagcattggaggtgcagcagccatgagtgcaggtctggac
aatttcacccatgagtctgtcaccaggaaagggatgaaagagaagaactggccggctttg
ctcatactcgtcatcatcgcactgacaatcggaggcaacatccttgtgatcctggcagtg
tcgctggagaagaagctccaaaacgccaccaacttcttccttaggtcgctggccgtggcg
gacatgctcgtaggcatcctggtcatgccggtttccctcatcaacatcctctatgactac
gcctggcctctccccagcgccctctgtcccatctggatctacctggacgtgctgttctcc
accgcctccatcatgcacctgtgtgctatctccctggaccgatacgtcgccatccgcaac
cccatcgagcacagccgcttcaactccagaaccaaagctatgatgaagatcgccgccgtc
tggaccatatctataggtgtgtcgatgcctatcccagtgatcggcctccacaacgaggac
aaggtcttcgtcaacggcagctgtgtcctcaacgaggagcgcttcatgctgattggctcc
tttgtggccttcttcatcccactggtcatcatggtggtgacgtactgcctcaccatacag
gtgctccagaggcaggccactgtcttcctgtgcgagagaaagagttcctcccagcagcca
ttgcacacacccgcaatgacaaatacattgcagcctccgcccaacaccttccacgttccc
cagatcacacttgctgcttcagactcaccagagttaaaggccccgccccctcagagcaga
cgaaacaccttgagctgtctgaaaggagccgagcccagcatgctgctcagcacctccaag
tcagatagcataagcatcatccccagctcggagatggcgtctcagctcagctcgccagct
gcgggaccgggacggagcgacacgtctggttgtcacgggcgacgggggatgatgcaggcc
ataaagaacgagaggcgggcctccaaggtcctgggaatcgtgttcttcctcttcctcatc
atgtggtgtcccttcttcatcaccaacgtcaccttcgtcctgtgccggggctcctgcaac
gagtcgctgctcaacgacctcctcaacgtcttcgtctgggtgggctacatctcctctgga
gtcaaccctctggtctacaccctcttcaataagacctacaggagagcgttctccagctac
atcaggtgccagtacaatgtgggcgccaacgcagccggaccaggttgcaaaaccctcctg
gttcccccgccgtgctcgtcgcacgccgtgacccccctactgatgggcagtcacgggaaa
gccggcatggaccgcaatagtaactgtcgcaacggcggtaggggggacaacgggaggctg
acggtggacccggatgacatgacagatgatgaaacacaaatcggaatagtgtcgcacagc
ttctctgaatgccacaacatcgacatgctttcggaaacggagccggaaacggaggtgaag
caggagctgtcacttatcagctacagccccacctccatagaacacaccagcagtgtgtga
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