Etheostoma cragini (Arkansas darter): 117937364
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Entry
117937364 CDS
T07493
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117937364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117937364
03036 Chromosome and associated proteins [BR:
ecra03036
]
117937364
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117937364
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117937364
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
117937364
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117937364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
zf-C2H2_jaz
SET
zf-met
Zn-ribbon_8
zf-C2H2_11
zf-C2HE
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117937364
NCBI-ProteinID:
XP_034717163
LinkDB
All DBs
Position
21:complement(3839276..3844172)
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AA seq
949 aa
AA seq
DB search
MSGRSTGVEWVETTEEVVITECIPPENNTPAVIVPVLEPVETPIQKLLDTVGHEDNPEAG
GVFCCEECLPLFQDQSDPANINGPSFILDFPSSKGLPQRALLTLPYGLMVGRSSIPSAGI
GVINHGPVVSPGMHFGPYEGEETTRENAIASDFSWEICKEKGKYEYIDAARESHSNWMRY
VNYARNKEETNLLAVQYKDSILFHCCRAIHPGDELMVWPSSKFLSHFSEAWTQVWVMKLN
ATESSTAATSQVFLCSHCQLSFTTESFLQRHTENVHIQPEADWTAPAAEAVEPENLTSNV
ESGHTSASLVVLPVDPVESKTCGDCGKIFKQIPHLRRHKLCVHSNKRPYCCPQCRRSFSQ
ASGLIRHQLVHKKPSAIKETTTVPNQERILTEKKESLTPGAELINTADSSVSEEIKDMSE
SENVQETMDITETENGSVGEAETSPSNCSDCGKRYTNEASLKKHKVNVHKRLRPYVCNTC
QKCFGQYNDLTRHLQHHQKSKSKRGEKPNKAPEDFTSMPFSCAECSLTFSSVDSLQQHIT
EHNSEEVTVEIQDDDPVTAGDDQSHDPDFSPHPSMAKTVESIQKHQRPQRLGVRSKISAI
TKLIAPKQRAAVCKKPLAGPAQANKTSTEPEAPAVRNAELYKWFSCNRCKRTYANPDDLK
AHKCTLRLHKCGQCEATFNKPGFLKRHEKMVHVHAKSFSCDRCDKVFATTGNLRQHQKSN
TCMKYHCTSELFPCSFCQFSFTMKSYLIKHIKRHHPEEYLSHHDSDSLADQLEEEEEEEE
RGKEYVCPHCRKSCANAKAFRSHACFQQVKVLYLCTDCGKGFTNHYGLKQHQRIHTGEKP
YSCPHCSKSFSYTGQLNVHLRTHTGEKPYLCTHCGESFRQSGDLKRHERKHTGVRPYNCP
ECCKSFSRPQSLKAHQMLHLGQRMFECTQCGKSFSRNYHLRRHHQKMHS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaggagcaccggcgtggagtgggttgagacgaccgaggaggttgttataaca
gagtgcattccccctgaaaacaacacacctgcagtgatagttcctgttttagagccagta
gaaacgccaattcagaagttactggacactgtgggacatgaagacaacccggaggccggt
ggtgtcttttgttgtgaggagtgtctgcctctcttccaggaccagagtgatcccgctaac
attaacggcccatcttttattcttgactttccatcgagcaagggtcttccccagagggcc
ctcctcactcttccctatggtctcatggtaggcagatccagtattcccagtgcaggcatt
ggggtcataaatcatggaccagtagtgtctccgggaatgcactttggaccatatgaggga
gaagagacaacgagagaaaatgcaattgcaagtgacttctcctgggagatttgcaaagaa
aagggtaaatatgagtacattgatgcagccagagaatcacactcaaactggatgaggtac
gtcaattatgctcgtaataaagaggagacaaatttactggcggtccagtacaaagacagc
atcctttttcattgctgtcgtgccatacaccctggagacgagcttatggtgtggcccagc
agcaagtttctcagccattttagtgaagcttggacccaggtgtgggttatgaagttgaat
gcaacagagagtagcacagctgcaacatctcaggtcttcctgtgctcccactgtcagctg
tccttcactacagagtccttcctccagcgacatacagaaaatgtccacatacagcctgaa
gcggactggacagcaccagctgctgaggcagttgaacctgaaaatcttacatcaaatgtt
gaatcaggtcacacttcagcatccctggtggtattgcctgttgatcctgtcgagtccaaa
acatgtggtgattgcgggaagatttttaagcaaatacctcaccttaggaggcacaaactt
tgcgtccactctaacaaacgtccctactgctgcccacagtgccggcggagttttagccag
gcatctggcttaatcagacaccaactagttcacaaaaagccatctgcgataaaagagaca
accactgttcctaatcaggaaaggattctgacggagaagaaagagagcttgactccgggg
gctgaacttattaacactgccgattcctctgtatctgaggaaataaaggacatgagtgaa
agtgagaatgtacaagaaacaatggatataactgaaactgaaaatggcagtgtaggagag
gcagaaacctccccctccaattgttcagactgcggtaagaggtacacaaatgaagcatcg
ctgaaaaagcataaggtgaatgttcataagaggttacgtccgtacgtctgcaacacgtgt
cagaagtgcttcggccagtacaacgacctcaccaggcacctgcagcatcaccaaaaatct
aaaagcaaacggggagaaaaaccaaataaggctccagaggactttaccagcatgcccttt
agctgtgctgagtgttcactgactttttcttcagtggactcccttcagcagcacataact
gaacataactccgaggaggtcacagtggaaattcaagacgatgacccggtgactgctggt
gatgatcagagccacgatccagacttcagcccgcatccctcaatggctaaaacagttgaa
tctatccaaaagcatcagaggcctcagcgacttggagttagatcaaaaatttctgccata
accaagctcatagctccaaaacaaagggcggccgtctgcaagaagccgttagcgggtcct
gcgcaggctaacaagacctccactgaaccggaagcacctgctgtcagaaatgcagagtta
tacaaatggtttagctgtaatcgctgtaaacgaacatacgcaaacccagatgatctcaaa
gcacataagtgcactttgagactgcacaagtgtggtcagtgtgaggcgactttcaacaag
cctggcttcctaaaaagacacgagaagatggtgcatgtacatgcaaaatcattcagctgt
gaccgctgcgataaagttttcgccacaaccggtaacctgaggcagcatcagaagagcaac
acttgtatgaagtatcattgcacgtctgagcttttcccatgctccttttgtcagttctcc
ttcacaatgaagagctaccttattaaacacatcaagaggcaccacccggaggagtatctg
tcccatcatgattcagacagcctggcggatcagctggaggaagaggaagaggaagaggag
agggggaaagaatatgtatgcccccattgccggaagagctgtgcaaacgcaaaagcgttc
agatcccacgcgtgcttccagcaggtgaaggtgctgtacttgtgcaccgactgtgggaag
ggcttcacaaaccactacggtctcaagcagcaccagcgcattcacacgggcgagaagccg
tacagctgccctcactgcagcaagtctttctcttacaccggccagctcaacgtgcatctc
cgcactcacaccggggagaagccgtacctgtgcacccactgcggggagagcttccggcag
tcgggagacctgaagcgacatgagaggaagcacacgggggtgaggccctacaactgcccc
gaatgttgtaaaagcttcagccgcccccagagtctcaaagctcaccaaatgcttcacctg
ggacagcgaatgttcgaatgcacccaatgcgggaagagcttttcccgaaactatcatctc
aggagacaccatcagaagatgcactcatag
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