Etheostoma cragini (Arkansas darter): 117937936
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Entry
117937936 CDS
T07493
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117937936 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecra03032
]
117937936 (pola1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117937936 (pola1)
DNA replication proteins [BR:
ecra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
117937936 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
117937936
NCBI-ProteinID:
XP_034718076
LinkDB
All DBs
Position
22:complement(11334564..11384176)
Genome browser
AA seq
1476 aa
AA seq
DB search
MAPVSNPEKDMDGPDGDDGGDTCGLAKSRSRREKREKVGRKSALEQLKKAKLGEKIKYEV
EEFTSVYEEVDEQQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVENKKGKA
GAKGAGSKTNLKKSAVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPT
LLTPPPVVTLKKKKSLGSSMNPFSIKPQMPKESASATGLKAKVIRPPPSDPTPRLSACLP
SSTTPAPPVEKHRAKVEELDEEQEDDPLALDGVDFDEPMEVGLEEEKPALKENAESSTKA
AEVAVKVEPKAEPQDPVLLTNRIGSSWGQEEEGGASEAPAEIQVDSSQLPLVEGADGEQV
FRFYWLDAFEEPYSQPGVVYMFGKVWIESAHSYVSCCVTVRNIERTMYFLPREYKVNTKT
GEVLDTPVGMMDVYQEFNELSEKFRIMKFKSKKVEKSYAFEIPDVPSQSEYLEVRYSAEF
AALPSDLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLISQPVSWCKVEALAL
RTDLVTVVKDLSPPPITVMSISLKTIQNPKSHHNEIVSLSALVHYQFHMDKAPPQPPYQT
HFTVVSKPADCIFPYDFKDAVRKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFG
FDLEVILQRITVCKVPHWSKIGRLRRVNMPKLGGRGSFAEKSATCGRLVCDVEISAKELI
RCRSYHLTELAAQVLKTERVTVPQENIKNLYSDSPHLLYLLELTWTDTKLILQLMCELNV
LPLALQITNIAGNIMSRTLMGGRAERNEFLLLHAFHDKNYIVPDKPSFKKAQLEMYEGGE
DVGAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAH
NTKNKNEEDVSEDIPEIPDTNLEMGILPKEIRKLVERRKQVKQLMKQQDLNPDLYLQYDI
RQKALKLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTD
SIMINTNSKSLEEVYKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVENNG
EGRYSVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVELGEKVA
AGTVPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYIICKDGS
TLAASQRAYALEQLQKQEGLSLDTQYYLAQQVHPVVSRICDPIEGIDIMLIATWLGLDPS
QFRAHQQYQREEEADGMLGAPVQLTDEERYKDCERFTFTCPQCGTDNIYDSVFEGAGSKL
EPSLLRCCHIPCGSSPIADAVNISNKLLLDIRRHIKKYYSGWLVCEDQACQNRTRRLPIA
FSRHGPICPACTRATLRPEYSEKALYNQLCFYRFIFDWDHAAAKVLQGDERARAKLWNRE
RDVYRRLKEVPDKALATSSYSEINLAKLFQAFSSLK
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtatcaaacccagagaaggacatggatggtccggatggcgacgatggaggc
gacacctgtggtctggcaaagtctcgctccagacgggagaagagagagaaggtggggagg
aagtctgcactggagcagctcaagaaagccaagttgggggagaagatcaaatatgaggtg
gaggagtttacaagtgtgtatgaggaagtggacgagcagcagtactcgaagatggtacga
gaaagacaagaggatgactggattattgatgatgacggaacaggatatgtggaggatgga
agagagatctttgacgatgatttggatgatgatgtagttgaaaacaaaaaaggaaaagct
ggtgctaaaggagcaggctcaaagacaaacctaaagaaatctgccgtagccaagcccaac
accattaagagcctcttcatgaacagtaatgtcaagaggcctgctgagaaagacgtagac
ctgtccaaagatgacctattaggagatatcttacaggacctgcactctgagaaaccgact
cttctgactcctccgccagtggtcactctgaagaaaaagaagtctcttggatcatctatg
aatcccttttccatcaaacctcagatgccaaaggagtcagcctcagctacaggtttaaag
gccaaagttatcaggccaccgccatctgacccgacccccaggttatcagcttgcctccct
tcttccaccacacctgctcctcctgtggagaagcatagggcaaaagtggaggagctggat
gaagagcaagaggatgaccctctggctttagatggggttgactttgatgagccgatggag
gtcggacttgaggaggagaaacctgcgcttaaagaaaatgctgagtcttcaactaaagca
gcagaagtggcagttaaggtagagcccaaagcagagccccaggaccctgtgttattgacc
aaccggattggaagctcttggggacaagaggaggaaggtggcgcaagcgaggctccagca
gagatacaggtggactccagccaactcccgttggtggaaggcgcagacggagagcaagtc
tttcgcttctattggttggatgcctttgaagaaccctacagccaaccaggtgtggtgtac
atgtttggaaaagtgtggattgagtctgcacattcttatgtcagctgctgtgtcactgtc
aggaacattgagcggactatgtactttctgcctcgtgaatataaagtcaacaccaagacc
ggggaggtgttggacactcctgtaggaatgatggatgtctaccaggagtttaacgaactc
tctgagaagtttaggatcatgaagttcaagtccaagaaagtggagaagagctacgccttt
gaaattcctgatgtgcccagtcagagcgagtacttggaagtccgatattctgctgagttc
gctgcgctgccttccgaccttaaaggggcaaccttttcccacatttttggaaccaacact
tctagtctggagcacttcctcctcagcaggaagatcaaggggccttgctggctggacatc
aaaacaccacagctgatcagccagccggtcagctggtgtaaggtggaggctctggccctt
aggaccgacctggtcactgtggtcaaagacctgtcgcctccacccatcacagtcatgtcc
attagcctcaagactatccaaaaccccaagtcacatcacaacgagattgtgtccctgtct
gcactggtccactatcagttccatatggacaaagctccacctcaacctccataccagacc
cattttactgtggtcagtaaaccggctgactgtatcttcccctacgactttaaagatgca
gtgaggaagaagaatgggaaagtggaaatagctgctacagagcggactctgcttggcttc
ttcctggccaagatgcacaaaatcgaccctgatgtgctggttggtcacgacatctttggt
tttgacctggaagtgattctgcagagaatcactgtgtgcaaggttccccactggtctaag
attggacgtctcaggagggtcaatatgcccaaactagggggtcgtggttcctttgcagag
aagagcgcgacctgtggtcgtctggtgtgcgacgtggagatctcagccaaggagctgatt
cgctgtagaagttaccatctgactgaactggctgcacaggtgctgaagacggagagagtc
acagtccctcaggaaaacatcaagaatctctacagtgactctcctcacctgctctacctg
ttggagttgacctggacagacaccaagctgatcctccagctcatgtgtgagctcaacgtg
ctgccgctggccctgcagatcaccaacattgctggcaacatcatgtctcgtactctaatg
ggcggccgcgcagagaggaacgagtttctgttacttcatgccttccacgacaaaaactac
attgtccctgacaaaccctccttcaaaaaggcccagctggaaatgtacgagggtggagaa
gatgtgggtgcagggaaaggcaagcggaaaaagaaggcagcctatgctggaggtctggtg
ctggatcctaaagttggtttctatgacaagtttgtgttgctgcttgacttcaacagcctc
tatccctcaattattcaagagttcaacatctgcttcaccactgtacagagggaggctcac
aacacaaagaataagaatgaggaggatgtgtcagaagacattcctgaaattccagataca
aacttggagatgggaatcctgcccaaagaaatcaggaagctggtcgagcggcgtaaacag
gtcaagcagctgatgaaacagcaagacctcaacccagacctctacctacagtatgacatt
cgccagaaagctctgaagctgacagcaaacagtatgtacggttgcctgggattcagcttc
agccgcttctacgccaagccacttgccgccctggtcacacacaagggtagagagattctg
atgcacaccaaagacatggttcaaaagatgaatctggaagtcatttatggagacactgac
tccattatgattaacaccaacagcaagtctctggaggaagtctacaaacttggcaacaag
gtgaaggccgaagtaaacaagctgtacaaactgctggagatcgacattgacggtgtcttt
aagtcgcttttactgctgaagaagaagaaatacgctgccttggtggtggagaacaatggt
gaaggacgatacagtgtcaagcaggagctcaaaggcttggacattgtgcgcagagattgg
tgtgacctggccaaggaatgtggcaactatgtgattggtcaaatcttgtcggaccagagt
cgtgatgtcattgtggaaaacatccagaaacacctggtggagttgggagagaaagtagca
gctggaaccgtcccactcaaccagtatgagatacacaaggctttgactaaagatcctcag
gactatccagataagaagagcctccctcatgtccatgtggctctatggatcaactcccag
ggtggtcgcagggttaaagctggagatacagtctcctacatcatctgcaaggatggttcc
acgctggcagccagtcagagagcctacgctctagagcagctccagaagcaggagggtctc
agcctagacactcagtactaccttgcccagcaggtccaccctgtggtgtctcgcatctgt
gaccccatcgagggcatcgatatcatgctcatcgccacatggctgggtcttgaccctagt
cagttccgggcacaccagcagtaccagagggaggaagaggctgatggcatgctgggagct
ccagtccagttgactgacgaggagcgctacaaagactgcgagaggttcaccttcacctgc
cctcaatgtggcactgacaacatatacgacagtgtctttgaaggagctggatcgaagttg
gagcccagcttgttgcgatgctgtcacatcccctgtgggagcagccccatcgccgacgct
gtgaacatcagcaacaaactgctacttgacattcgtcgccatatcaaaaaatactactct
ggctggttggtgtgtgaggaccaggcatgccagaacagaaccagacgtttacccatcgcc
ttctcccgccacggccccatctgccctgcctgcaccagggcgactctcagacccgagtac
tccgagaaggccctgtacaaccagctctgcttctacaggttcatctttgactgggaccat
gcagctgccaaagtactacagggtgatgagagagctcgggcaaagctgtggaacagagaa
cgagatgtgtaccggaggctgaaggaagtgccagataaagccttggccaccagtagctac
tcggagattaacctggccaaactcttccaggccttctcctccctcaagtaa
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integrated database retrieval system
