Etheostoma cragini (Arkansas darter): 117942784
Help
Entry
117942784 CDS
T07493
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117942784 (spata5l1)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
117942784 (spata5l1)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117942784 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
AAA_14
TIP49
Vps4_C
AAA_7
bpMoxR
Rad17
NTPase_1
NACHT
ABC_tran
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117942784
NCBI-ProteinID:
XP_034724329
LinkDB
All DBs
Position
1:complement(11828349..11832970)
Genome browser
AA seq
747 aa
AA seq
DB search
MSLRLLSVDPSDRGSQRCRLGAGLMSALGLSLGSPLLVSVPGGSCLCTAWPRPDLAEGFL
QMDLKCSSPSLISHPPSHLSLDPGQLTPLPCPKLKAVKITVVVQSVDFKKHTPPRLVHEL
LKDMLKGVYVHKKNVINLEDFDTEIKYVIIESINLDSANAGFITSKTGVEIAGIQTVRHY
MSQLQDQHTVPLGGLEEVSASLRETLQLPLLYPGTLSSLGVSCPRGVLLVGPPGVGKTLL
VRSVVGEVGASLVVVRGPEVVGSRPGESEEKLRAVFERARSAAEEGPCVLFLDELDSLCP
KRTGSSAPENRLVAQLLTLMDGMNPSDRFLIVGATNRPDSLDPALRRPGRFDREVFIGAP
TVQQRKAILSVLCARMPVGPSVDMAELAQRTTGYVGADLSALCREAAMQAIRENSKSLGE
QVLGMKHFQEALKAVRPSCLRSSLGRTELASMSWEQIGGLEEVKLKLRQSIEWPMLYPEA
FVRLGLCRPRGVLLYGPPGCAKTTLVKAAASSSHCAFLSVSGADLYSPYVGDSEKALAQL
FRQARACAPCILFLDEIDSLIGSRSNSQTPNSVQTRLLSVLLNEMDGIGLKTLERRGTEK
ILQAEGVEENHKQEKLDCQEVCNKDVMVVAATNRPDCLDNALLRPGRLDHIIYVPPPDQQ
ARLCILKLRTDSMPVGADVCLEELAAKTEFYSGADLENLCKEAALLALQEENMEASIIKH
TYFLRALSKMRPSLTAQQIQTYQKPPR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaggctgctgtcagtggatccatcagaccggggctctcagagatgcaggctg
ggtgcaggcttgatgtccgcgcttggtctgagtctgggctcccctctgttggtgtctgtt
cccggggggagctgtctgtgcaccgcctggcctcggcctgacctggcggaaggtttcctt
cagatggacctgaaatgttcctctcccagcctgatctctcacccaccctcacatctcagc
ttggaccctggccagctgacacctttgccctgtcccaaactgaaagctgtaaagataact
gtggtggtccagagtgttgattttaaaaaacacacacctcctcgacttgttcatgagcta
ttgaaggacatgcttaaaggtgtgtatgtccacaagaagaatgtgataaacctggaggat
tttgatacggagattaaatatgttattattgaaagcatcaatttggattctgccaatgct
ggattcatcacctcaaaaactggggtggagatagctggcatccagacagtccgacattac
atgagtcagctgcaggaccagcacacggtcccacttgggggactggaggaggtgagcgcc
tccctgagagaaacactgcagctgcccctgctctatccaggcaccctaagctctctgggt
gtgtcatgtcccagaggtgtgctcctggtggggccgccaggtgtgggcaagaccctgcta
gtccgcagtgtggtgggggaggtgggagccagcctggtggtggttagaggtccagaggtg
gtgggctcacggccgggtgagagtgaggagaagttgcgtgctgtgtttgagcgggctcga
tctgcagctgaagagggtccctgtgtgctgttcttagatgaattagactctctgtgtccg
aagagaaccggctcgtcggcgccagagaaccgcctggttgctcagctcctcacacttatg
gacgggatgaatccgtcagatcgcttcctcatcgtcggagccaccaaccggccggacagc
ttagacccagcactgcgcaggcctggaagatttgacagagaagtttttattggcgctccc
accgtgcagcagagaaaagccatcttgtctgttctgtgtgcgaggatgccggtgggtccc
agtgtggacatggcagagcttgcacagagaaccacaggctacgtaggggcagatctcagt
gccctgtgcagagaggctgccatgcaagctatacgggaaaactcaaagagtttaggagag
caggtgttagggatgaagcacttccaggaggccctgaaggcggtgcgtccgtcctgcctg
cggagcagcctgggcaggacggagctcgcttcaatgtcatgggaacagatcggaggcctg
gaggaggtcaaactcaaactcagacagagcattgagtggccgatgttataccccgaggcg
tttgtccgtctgggtctgtgtcggccccggggcgtgctgctctacgggcccccaggatgt
gcaaagacgacgcttgtcaaggccgcggccagctcatctcactgtgccttcctatctgtc
agtggtgctgacctctactctccctatgtcggagactccgagaaggctttagcgcagctg
tttcgccaggcccgggcctgtgctccctgtatcctgttccttgatgagattgactctctg
attggctcgcggtcaaatagtcagacaccgaacagcgtacagacacgcctcctgtctgtg
ctgctcaatgagatggatggaattggcctgaagacgctggagaggagaggaacagagaag
atcctccaggcagagggagtggaggagaatcacaagcaggaaaagttggactgccaggaa
gtgtgcaacaaagatgtgatggttgtagccgccactaacagacctgactgcttagacaat
gccctcctcagacctggccggctggaccacatcatctatgtcccaccccctgaccagcaa
gcccgtctttgcatcctgaagttgcgtacagactcgatgcccgtgggtgctgatgtgtgt
ttggaggagctggccgcaaagacagagttttactctggagctgacttagaaaatctgtgt
aaagaggctgctctgttggcgctacaagaggagaacatggaggcttcgataatcaaacac
acatacttccttcgggccctcagcaaaatgagaccctctctcactgctcagcagatccaa
acatatcaaaaacctcccagatga
DBGET
integrated database retrieval system
