Etheostoma cragini (Arkansas darter): 117944403
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Entry
117944403 CDS
T07493
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117944403 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117944403 (prdm6)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117944403 (prdm6)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117944403 (prdm6)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117944403 (prdm6)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117944403 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Peptidase_S31
Motif
Other DBs
NCBI-GeneID:
117944403
NCBI-ProteinID:
XP_034727075
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All DBs
Position
5:complement(27667777..27758137)
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AA seq
636 aa
AA seq
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MLKPGDASGSAFLKVDPSYLQHWQQLFPQSQLKTPLAPPPPPPDRLSIPMDSLRPSRLHS
HLLASTHCPSSSSSTSSSSASSAAAAAAAALTPSSSISISTSAGISQLPVPQQIALFGQA
LAPVCGGPGGPGGGGGGGGDLMVVVPPENQHGHNPAAGLLHQAKEQSCGGVGVVSSSMKS
SGGGGGEEGGKAASSRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDMCADNRNGE
CPMHGPLHSLRRLVGTSSTAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICASQRIP
QGTWIGPFQGVPLVLDKLHSGAVRNSRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCA
RHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPT
TVMEAMTRQESLQSFSKNGKPSSSSSSTASTTLMRSMVFPHSPCPRNFSLLDKVGVGIQS
DSSFSQLGSKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDR
PYQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKC
ERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacgcaagcggctcggccttcttgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcagtcgcagctgaagactcctctggccccgccgccg
cctccgcctgaccgcctctccatccccatggacagcctgcgcccatcccgcctgcacagc
cacctcctggcctccacacactgcccctcctcgtcttcatccacatcctcctcctctgct
tcatcagcagcagcagcagcagcagcagctctaaccccatcctcctcaatctccatctcc
acctcggcagggatctcccagctgcccgtcccccagcagatcgcactctttggccaagcg
ttggccccggtgtgtggcgggcctggaggaccagggggaggaggaggaggaggaggagat
ctgatggtggttgtgcccccggagaaccagcatggtcacaacccagcagcggggcttctc
catcaggccaaagagcagagctgtgggggggtcggcgtggtgtcctccagcatgaagagc
agcggaggaggaggaggagaggagggtggcaaagcagcgtcgtccaggttcaagctgacg
tcggaggagctggactactacctgtacggacagcagaggatggagatcatcccactgagc
aatcacacgggagaggtcaacaatcgttgtgacatgtgtgcagataacaggaacggcgag
tgtccgatgcacggtcctcttcactctctgcgtcgacttgtcggcaccagcagcacggca
gctcctgtcaccctgccggatgtccctgattggctcagagatctgcccagagaggtgtgt
ctctgcaccagtacagttcctggtctgggttacgggatctgtgcatctcagaggatccct
caaggaacctggatcggcccgtttcagggagtccctctggtgctggacaaactgcattct
ggagcggtcagaaacagcagacacctgtgggagatctatgatgcagaggggacgttacag
cactttattgatggtaatgatcccagtaagtccagttggatgaggtacatccgctgtgcc
agacactgtggggagcagaacatgatggttgtacagtacaggtcctgtatcttttacaga
gcatgtatggatatccccagaggaacagagctgctggtttggtacaatgactcctacact
tccttctttgggataccgctgcagtgcattgctcaggacgaaaacttaaacgttccaacc
acggtgatggaagcaatgactagacaggaatcactccaatccttcagcaaaaacggcaaa
ccctcgtcttcctcctcttccactgcctccaccactctcatgcgctccatggtcttcccc
cattctccctgccctagaaatttctccctgttggacaaggttggggttgggattcagtcg
gactccagtttcagccagttgggttcaaagaaccaacgagtcctggcgagcccgacctcc
accagccagctaagcagtgacttcagcgactggcacctgtggaagtgtggccagtgcttt
aaaacgttcacccagaggattctgctgcagatgcacgtctgtccacagaatccagacaga
ccataccagtgtggccactgctcccagtccttctcccagccatcagatttgaggaaccac
gtggtgacgcactcgagtgaccgacccttcaaatgtggctactgcggccgcgcgtttgct
ggtgccacaacgctcaacaaccacatccgcacgcacaccggggagaagccgttcaagtgt
gagcgttgtgaccgcagcttcacacaggccactcagctcagccgccaccagcgacttccc
aacgagtgtaaaccggtgaatgagagcagcgagtccattgaggtggattaa
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