Etheostoma cragini (Arkansas darter): 117944608
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Entry
117944608 CDS
T07493
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117944608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
117944608
NCBI-ProteinID:
XP_034727462
LinkDB
All DBs
Position
5:22821574..22862800
Genome browser
AA seq
2518 aa
AA seq
DB search
MHIFFVKLTFLLSLIALTRGLRCSMPTESCLNQGRCVATPDGNGECRCLDGNVGSRCQFP
DPCTTSPCMNGGTCRAVSKGNTVDFSCTCRLGFTDRRCVTPINNVCISSPCRNGGTCELE
SLQTYKCRCPPGWSGKLCQQANPCASNPCANGGQCSAIESHYICSCTPFFSGKTCKQDVN
ECDVNPSPCKNGGLCINELGRYQCQCPQEYTGKHCESRYLPCNPSPCQNGGTCIQKGETS
YECSCVPGFMGKNCNHNIDDCPTHECQNGGTCVDGVNTYNCQCKPEFTGQLCTEDVDECQ
LMPNACQNGGTCHNTYGSYQCVCVNGWTGDDCSENIDDCASAACHQGSTCHDRVASFYCE
CPHGRTGLLCQLDDACISNPCQKGSNCDTNPVTGNHFCTCPSGYIGASCDQDVDECALGS
NPCEHRGKCINTKGSFQCKCQRGYVGPRCELDINECMSNPCMNEATCLDQIGDFHCICMP
GYEGEFCEIDTDECASSPCLNSGKCIDKINAFHCQCPIGFSGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCECTEGYSGRHCETDINECYSDPCHYGTCIDGLASFSCHCNPGYTGRLC
ETNINECLSQPCRNGGTCQDRENAYICSCLKGTTGINCEINIDDCKSNPCDYGTCIDKIN
GYECACKPGYTGTMCNINTDECAINPCYNGGTCIDGINSFTCRCPEGFHDATCFSQVNEC
LSNPCIHGHCEDKINGYKCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCILPYTGENCENLMAPCSSKPCKH
EGVCQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCRNGATCQNTLGSYRCVCKLGFT
GRNCDSNIDDCKPNPCSNGGLCKDEVNGFLCTCLPGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDDINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCPHGYIGLNCQALVRWCDSSPCKNGGTCWQRGTT
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNIHYCHCQIGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCMPGYMGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICSAGYV
GERCEGDINECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQRCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSTCEYDAQACGSLHCRNGGTCISGHKSPKCLCAPSFTG
PECQYPTDSPCNSNPCYNGGTCEYTSEAPYYHCVCPTNFNGLRCHILDYSFQGGFGHDIP
PPSEVEVTCNISLCEEAKHNKFCDVLCNNHACGWDNGDCSLNFDDPWKNCSASLQCWRYF
NNGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGQLVLVVHITPEQLLNNSFGFLRELSRVLRTNVIFRKDTKGEMMVYPYY
GNEHELKKYNVKRSVDSWSEVPVKVLNMVKRSLYDGAGESRRMKRELDHLQIKGSVVHLE
VDNRQCFQQSTECFQSTNDAAAFLGALASSGKLDVPYTIEAVFSGVDPQPPPDPYPIYLV
LGGVGILAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNT
SDISLMDDTQNEWGEDEPSDAKRFRQFDEQAILEVNDQTDHRQWTQQHLDAADLRIPSIA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVISDFIYQGA
NLHNQTDRTGETALHLAARYARSDAAKRLLEASADANVQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAGVEGMVEELINCHADVNAIDDFGKSALHWAAA
VNNVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYASAKVLLDHFANREITDHMDRLP
RDIAQERMHHDIVRLLDDYNLVRSPHMHGSLSTTLSPPLCSPNGYLGSMKQPQPQGQGKK
ARKPSAKGIGCKEGKDMKVKKKNSQDGKSGNLLDGSGVLSPVDSLESPHGYVSDVASPPM
MTSPFQQSPSVSLNHLQGMSDPHLSVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSGVQ
GAINGQCDWLSRMHGSMTQPSQFNPMRGAPGGQGGLHPGGQHGMMTSVHNGHPNTSLSQM
MTYQGIQNTRLAPQPHMMQQQAQQMQQMQNLQQLQQQQQQQQSIQLQHQNSNTTNSQNFI
SGELSSPELQQGTGNSSMPIHTILPQETQMMPSSINQSMPSNQFLTPPSQHSYSGPMDNT
PNHQVQVPDHPFLTPSPSSPDQWSSSSPHSNMSDWSESISSPPTSMQSQIGHIPEKFK
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgtgaaactaactttcttgttgtcgctgatagcactaacacgaggt
ctaagatgctccatgcctacggagtcgtgtttgaaccaggggaggtgtgtggcaactcca
gatggcaatggagagtgcaggtgcctggatggaaacgtaggaagcaggtgccagtttcct
gacccgtgcacaacctcgccatgcatgaacggcggcacatgtcgcgccgtgtccaagggg
aacacggtggacttcagctgcacctgcagactgggcttcaccgaccgccgctgtgtgaca
cccatcaacaatgtctgtatcagctcgccatgtcgcaacggaggcacctgcgagctggag
agtctccagacgtacaagtgccgctgcccacctggatggtcaggtaaactgtgccaacaa
gccaacccctgtgcctccaatccgtgtgccaacggtggccagtgctccgccattgagtcc
cactacatctgtagctgcacgcccttcttctctggaaagacctgcaaacaggacgtcaac
gaatgtgatgtgaatccttcgccctgcaagaatggtggtttgtgcatcaatgagcttggc
cgctatcaatgccagtgcccgcaggagtacacgggcaagcactgcgagagccgctacttg
ccctgcaacccgtcaccctgccaaaacggaggcacctgcatccagaagggagagaccagc
tacgaatgctcctgtgtgccaggttttatgggcaaaaactgcaaccacaacattgacgac
tgtccaactcacgagtgccagaatggcgggacatgtgtagatggagtcaacacttataat
tgccagtgtaaaccagaatttacaggtcagctctgcacagaggacgttgatgagtgccag
ctgatgcccaacgcctgccaaaatggcggcacgtgccacaacacctacggcagctaccag
tgcgtgtgcgtgaacggctggactggtgacgactgcagcgagaacatcgatgactgtgcc
agtgctgcatgccaccaaggatccacctgtcacgaccgcgtagcttctttctactgcgag
tgcccccatggccgcacaggactgctgtgccagctggacgatgcctgcatcagcaaccct
tgtcagaagggctccaactgtgacaccaaccccgtcactggaaatcacttctgtacctgc
ccatcgggatacatcggagcttcctgtgatcaggatgtggacgagtgtgctctgggttcc
aacccgtgtgagcacagagggaagtgtataaacaccaagggatcgttccagtgtaagtgc
cagcggggttacgtggggccacgctgcgagctggacatcaacgagtgcatgtccaacccg
tgtatgaatgaggccacgtgccttgaccaaataggagacttccactgtatctgcatgcca
ggttacgagggggaattctgcgagatcgatacggacgagtgcgccagcagcccctgcctg
aacagcggcaagtgtatcgacaaaatcaacgcctttcactgccagtgccccataggcttc
agtgggaacctttgccagatagacattgacgagtgtgccagcacaccgtgcaaaaatggc
gccaaatgcacagacggacccaataagtacacctgcgagtgcactgaaggttactctggg
aggcactgtgagacggacatcaacgagtgttactctgacccgtgccactacggcacctgc
atcgacggtctggcctccttcagctgccactgcaaccctggatacaccggccggctgtgt
gagaccaacatcaacgagtgtctgagtcagccgtgcaggaacggaggcacctgccaggac
agagagaacgcctatatctgcagctgcctcaaaggcaccacaggtataaactgtgaaatc
aacattgacgactgcaagagcaatccctgtgactatggcacctgcatcgacaagatcaat
ggctacgaatgcgcctgtaaacccggctacacaggtaccatgtgtaacatcaacactgat
gagtgtgccatcaacccctgctacaacggcggcacctgtatcgatggcatcaacagcttc
acctgcaggtgtccagaaggtttccatgatgccacctgcttctcccaggtcaacgagtgc
ctcagcaacccctgcattcacggtcactgtgaggacaagatcaacggctataaatgcctg
tgtgattctggctggagcggtaaaaattgcgacatcaacaacaatgagtgtgaatccaac
ccatgtatgaatggaggcacctgcaaggacatgaccagcggatacgtttgcacctgtcgc
atgggcttcactggaccaaattgccagaccaacatcaatgaatgtgcgtccaacccctgc
ctcaaccaggggacctgcattgacgatgtcgctggctacaagtgcaactgtattctgcct
tacacgggagagaactgtgaaaacttgatggcgccctgcagctccaaaccctgcaagcat
gaaggagtgtgtcaggagtctgaggactatcagagcttctcctgcgtctgtcctgaagga
tggcaaggccaaacatgtgaggtggacatcaaagagtgtgtgaagaatccctgtcgcaat
ggtgcaacctgccagaacactttgggcagttaccgctgtgtctgcaaactaggcttcact
ggacgcaactgtgatagcaacatcgatgactgcaagcccaacccctgcagcaacggaggc
ctctgtaaggatgaggtgaacggcttcctgtgcacctgcctgcccggctttcggggcaca
aagtgcgaggaggacatcaacgagtgtgagagcaacccgtgcaagaatggagccaactgc
accgactgcgtcaacagctacacatgtacctgcccgcccggcttcagtgggatccactgt
gaaaataacactcctgactgcactgaaagctcctgcttcaatggtggcacctgtgtggac
gacatcaacaccttcacatgtttatgtccgccgggcttcactgggagctactgccagcat
gacatcaacgagtgtgactccaaaccctgtctgaacggcggcacctgccaggacagctac
ggcacctacaagtgcacctgcccacacggatacatcggactcaactgtcaggccttggtt
cgttggtgcgactcgtcaccctgtaagaacgggggaacttgctggcagaggggaaccacc
tacagttgtgagtgtgagactggctggacgggactttattgtgatgtcccaagtgtctcc
tgtgaagtggcagccaaacagagaggagttgacgttgcccatctatgccgtaactcgggt
cagtgtctggacgcaggaaacattcattactgccactgccagattggatatactggaagt
tactgtgaggagcaggtggacgaatgcaccccaaacccctgccaaaacggagccacctgt
actgactttttaggtggatacacttgcaagtgcatgccaggatatatggggaccaactgc
tctgacgagatcaatgaatgtttctcccagccgtgccagaatgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccacggggaacccaaggtgtgcactgtgagata
aacatcgacgattgcaacccgttcaccgacccagtcaccaaagagcccaagtgtttcaac
aaagggaagtgcgtggatcgagtcggaggctaccactgcatctgctctgcgggatacgta
ggggagcgctgcgagggagacatcaacgagtgcctctccaacccctgtgacccgcggggc
acgcacagctgcatccagctcaccaacaactaccgctgcgagtgtcgcaccggatacaca
ggccaacgctgtgacacagtgtttgatggatgtaagggaaaaccgtgtcgcaatggaggg
acctgcgctgtagccagtaacaccccacatggcttcatctgcaaatgtcctcctggcttt
actggttccacatgtgaatatgacgcccaggcctgtggcagtcttcactgccgcaatgga
ggcacctgcatctccggccacaagagtcccaagtgtctgtgcgccccgtcattcactggg
cctgagtgccagtatcccaccgacagcccctgtaattccaacccctgctacaacggtggc
acgtgtgaatacacctctgaggcgccatactaccactgcgtctgccccacaaacttcaac
ggcctccgatgccacatccttgattacagcttccaaggagggttcggacacgacatcccg
ccgccgtctgaggtggaagtcacctgcaacatttcgctctgtgaggaagctaagcacaac
aagttctgcgatgtgctctgtaacaaccacgcgtgcggctgggacaacggagactgctcg
ctcaactttgacgatccgtggaagaactgctctgcctcgctgcagtgctggcgatacttc
aacaacggaaagtgcgattcacagtgtgacaacgcaggatgcctctacgacgggtttgac
tgccaaaatctggagggacagtgcaatcctctgtatgaccagtactgcaaggatcactac
gctgacggccactgcgaccagggctgcaacaatgctgagtgcgagtgggatggcttggac
tgtgccaacaacatgcccgagaagctggccgtaggccagttggttctggtggtccacatc
accccggagcagctcctcaacaactcctttggcttcctgcgagagctgagccgcgtcctc
cgtaccaatgtgatattcaggaaggacaccaagggcgagatgatggtttacccgtactac
gggaacgaacacgagctgaagaagtacaacgttaaacgctcagtggattcgtggtccgag
gttcctgtcaaggtgctgaacatggtgaagaggagcctgtatgatggggcaggcgagagc
agaagaatgaagagggagctggatcacctccagattaaaggttcagtcgtccacttggag
gtggacaaccggcagtgcttccagcaatccactgagtgtttccagagcaccaatgatgcc
gcagctttcctcggggccttggcctccagtggcaaactggatgttccctacaccattgaa
gctgtctttagcggggtggacccacagcctccaccggacccttatccaatctacttggtt
ctgggcggcgtagggatactagccttcctcggagtggggatggtggctgcacgaaagcgc
cgccatgaacacgggcgtctctggctccccgagggcttcaagaccacagagacaagcaag
aagaagcgacgtgagcctgttggagaggattcggtgggattaaagccactgaaaaacacc
tcagacatttcactcatggatgacacgcagaatgaatggggagaggacgagccttcggat
gcaaaacgcttcaggcagtttgacgagcaggctatactggaggtgaacgaccagacggac
caccgccagtggacacagcagcacctggacgccgctgacctgcgcatcccctccatcgct
cccacaccccctcagggcgagattgagaatgactgcatggatgttaatgtccgaggacca
gatggattcacaccgctgatgattgcatcctgcagcgggggaggtttagaaacaggcaac
agtgaggaagaggaggatgcgtctgctaacgtgatcagcgacttcatttaccagggcgct
aaccttcacaaccagactgaccgcacaggtgaaaccgctcttcacctggccgcccgctac
gcccgctctgacgctgccaaacgcctgctggaggccagcgccgatgccaacgtccaggac
aacatgggcaggacgcctctgcatgctgctgtggcagcggatgcccagggcgtgttccag
attctgataagaaaccgcgccacggacttggatgcccgcatgcatgatgggactacaccc
ctgatcttggctgccaggctggcaggagtggagggcatggtggaggagctcataaactgc
cacgctgatgtcaatgcaattgatgattttggtaaatcagccctacattgggccgcagca
gtaaataatgtggaggctgcaattgtgcttctcaaaaacggtgccaacaaggacatgcaa
aacaacaaggaggaaacccctctattcttggctgcccgggaaggaagctacgcgtctgcc
aaggtcttactggaccactttgccaacagagaaataactgaccacatggaccgcctaccc
agagacattgcacaggagagaatgcaccatgacattgtgcggctgctggacgattacaac
ctggtacggagtcctcacatgcatgggtcactcagcaccacattatcaccccctctctgc
tcgcccaacggctacctgggcagcatgaagcagccccagcctcaaggccaggggaaaaag
gcaaggaagcctagcgccaagggcatcggctgcaaggagggcaaagacatgaaggtaaag
aagaagaattcgcaggatgggaaatccgggaacctcctggatggctcaggtgtactgtcg
ccagttgactcgttggagtctccacacggctatgtttctgatgtggcctcgccgcccatg
atgacctcacctttccaacagtcaccatctgtatccttgaaccacctccagggtatgtct
gatccacacctgtccgtaaaccacatggtgatgccaaacaagcaggagctggctcggatg
cagtttgaccccctgccaccccgtcttacccatctgcctgtgtctggctccggtgtccag
ggcgctataaatggccagtgtgattggctgtccaggatgcacggcagcatgacccagcca
agccagtttaacccaatgagaggagcaccgggtggtcagggaggtctgcacccaggaggg
cagcatggcatgatgacctccgtccacaacggccatcccaacaccagcctgtctcagatg
atgacctaccaggggatccagaataccagactggctccacagccccacatgatgcagcag
caggctcagcagatgcagcagatgcagaacctgcagcagctccagcagcagcagcagcaa
caacagagcatccagctgcagcaccagaactctaacacaaccaacagccagaatttcatc
agcggggagctcagttccccggagctccagcaaggcactggcaactccagcatgcccatc
cacaccatcctcccgcaggagacccagatgatgccctcctccatcaaccagtcaatgccc
agcaaccaattccttaccccaccctcccagcacagctattcagggcccatggacaacacc
ccaaaccatcaggtccaggtgcctgaccacccctttctcaccccctcccccagctccccc
gatcagtggtcaagttcatctcctcattccaacatgtctgactggtcggagagcatttca
agtccaccgaccagcatgcaatctcagattggacatatacctgaaaagttcaaataa
DBGET
integrated database retrieval system
