Etheostoma cragini (Arkansas darter): 117946087
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Entry
117946087 CDS
T07493
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117946087 (cdkal1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117946087 (cdkal1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117946087 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
117946087
NCBI-ProteinID:
XP_034729822
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Position
6:complement(12293306..12517920)
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AA seq
478 aa
AA seq
DB search
MMTDDPTDADLWVLNSCTVKNPAEDHFRNSIKKALEQQKKVVVAGCVPQAQPRMDYLKGL
SIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDGGRRLGGARLDLPKIRKNPLIEIISINT
GCLNACTYCKTKHARGDLASYPIEELVERARQSFQEGVCEIWLTSEDTGAYGRDIGTDLP
TLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHVPVQSASDSVLMD
MKREYCIDDFKKVVDFLKERVPGVTIATDLICGFPGETEEDFQETVDMVKLYRFPSLFIN
QFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFHSYNPYDHKVGERQRVLVTEESFDAQYY
VSHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKHFLKGRPVEESMPFTPSIAAPLQKGEVS
GLMQHQTPNGIQGPASSMPSSSDLLIGSYSLDREVLKKLGIGLTLAAAILAFVVEKLY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgatgacccaacagacgcagacctgtgggtgctgaacagctgcactgtgaaa
aaccctgcagaggaccacttcagaaactcaatcaaaaaagcccttgaacagcagaagaag
gtggtagtagctggttgtgtcccccaggctcagccacggatggactacctcaaaggactc
agcatcattggggtccaacagattgatcgagtggtggaagtagtggacgaggctgttaaa
ggccactcagttcgactgttgggtcagaagaaagatggaggccggaggctcggaggagcc
agactggacctgcccaagatcaggaagaacccgcttattgaaatcatctctattaacact
gggtgtttgaacgcatgtacgtactgtaaaactaagcacgccagaggagacctggccagc
tatcccatcgaggagcttgttgagagagccaggcaatcgttccaggagggagtgtgtgag
atctggttgaccagtgaagacaccggagcttatggtagagacatagggacagacctgccc
acattgctgtggagattggtggaggagattcctgaaggagccatgctgaggctgggtatg
accaacccaccatatatcctggaacaccttgaggagatggctaagatattgaatcatcca
cgcgtctatgccttccttcatgttcctgtgcagtctgcctctgacagcgtcctgatggac
atgaagagagagtattgcattgatgacttcaaaaaagtggtggacttccttaaagagagg
gtcccaggtgtaaccattgctacagatttaatctgcggttttcctggtgagacagaggaa
gacttccaagagacagtagacatggtgaaactctaccgattccccagtctcttcatcaac
cagttctaccccagacccggtacacctgctgccaagatggagcaagtaccagcacatgtg
aagaagcagaggactaaagagctgtcacaactcttccactcttacaacccctacgaccat
aaggtaggggagaggcaacgtgtgttggtaacagaggagtcatttgatgcccaatactat
gtgtctcacaacaagttctatgaacaggtgctggtacctaaaagggctgagttcaaaggg
aagatgattgaggtggacatctacgaggcaggaaaacacttcctgaaaggccggccagtg
gaagagagtatgcccttcactccctccattgccgcaccgcttcagaaaggagaggtgtcc
ggcctgatgcagcatcagacgcccaatggcatccaagggcctgcttcttctatgccttct
tcatctgatttgttgataggctcttacagtcttgacagggaagtactgaagaagctgggg
atcgggctcactctggcagcagccatcttggccttcgtcgtagagaaactgtactga
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