Etheostoma cragini (Arkansas darter): 117947740
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Entry
117947740 CDS
T07493
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00531
Glycosaminoglycan degradation
ecra01100
Metabolic pathways
ecra04142
Lysosome
Module
ecra_M00076
Dermatan sulfate degradation
ecra_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117947740 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117947740 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ecra02042
]
117947740 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117947740 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
117947740 (si:dkey-72l14.3)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
117947740 (si:dkey-72l14.3)
Bacterial toxins [BR:
ecra02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
117947740 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Enzymes
117947740 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecra00537
]
Enzymes
117947740 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
117947740
NCBI-ProteinID:
XP_034732826
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All DBs
Position
7:20305229..20318252
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AA seq
562 aa
AA seq
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MAWAEPRSSPDPKPELKPKPYTLRTHTFSSDILQVQHPVLLPFFLLLAAFADLGIAGPQQ
PACPPLLSGQPFIIFWGIPDSSCSGRPDPRSFGMEREGRVAVFYEDTLGNYPYFIDKDTP
VNGGLPQHTRLDNHLQKTQQDLEAVLPAPRYLGLGVLRYAEWVPQWSRNRERQAMYLEAS
RNLLKTFFPHWTPEEVEKWSQVDFEATAQSVMVETLREVKRLRPKALWGVSPYPSCYNGD
PAQTILANFTGQCPATEMALNDELLWLWKRCSALYPLLTLEKLQSGTSGARLYLSSQIRE
SLRVSSLTGTAFDLPVFPLVKSVYASTNTFLSQSDLVSTIGESAAMGTAGVVIWERSETK
TERECQDLAEFVRKVLGPYSINVTTATRLCSASLCQGKGRCIRQNSESSAYLHLPPPSEL
VEKVTEKAEAAKPTDQPDTNTKPADPDPAEIWKKDFQCQWYKTADGDVSDQQSPQDGASV
VGTVKENAGDVMGTITTSAIASTTAFRTKGASVIELRGSSSPGTGSPSPSLEVTTDGGTK
PWSTPNLTVLLLLVAVSVCLEH
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggccgagccacggtcgagtccagacccaaagccagaactgaaaccaaaacct
tacactctcaggactcacactttttcatcagacatccttcaagtccagcatccagtttta
ctgcccttctttctcctgcttgctgcatttgctgacctaggtattgctggtccacaacag
ccagcttgcccccctctcctgtctggacagccttttataatcttctggggcatccctgac
tcttcctgctccggtcggccagatccaagatcttttgggatggaacgggagggccgtgtg
gccgtcttttacgaggacacactggggaactacccttattttatagacaaggacacaccg
gtcaacggtgggctaccacagcacacgcggctggacaaccacctccaaaagacacagcag
gacttggaggcagttttaccagccccaaggtaccttgggctgggggtgctgcgctatgca
gagtgggtcccccagtggtcaaggaacagagaaaggcaggcaatgtatctggaggcatcg
agaaacctgctgaagaccttcttccctcactggacccctgaggaggtggagaagtggtca
caggtggacttcgaggcaacagcccagtcagtaatggtggaaactctacgggaggtcaaa
aggttaaggcccaaagcattatggggcgtctccccttaccccagctgctacaacggtgat
cctgcccaaaccatattagccaatttcaccggccagtgccctgctacggagatggctctt
aatgacgagcttctgtggctttggaaacgatgttcggccctctaccctctcctcaccctg
gagaagctgcagagtgggacctcaggagccaggctttatttgtccagtcaaatcagagaa
tcacttcgagtatcatctctgactgggactgcatttgatcttcctgtattcccattggtc
aagagtgtctatgcctcaacaaacactttcctgtcacagtcagacctggtcagcaccata
ggagaaagtgctgccatgggaacagctggagttgtcatctgggagagaagtgagactaag
acagagagagagtgtcaggacctggcagagtttgtccgtaaggtcctgggaccctactcc
atcaacgtaaccacggcaactcgactctgctcagcctctttgtgccagggaaagggcaga
tgcatccgccaaaattcagaaagctctgcatacctccacctcccacccccatccgaatta
gtggagaaggtgactgagaaggcagaggcagcaaaacccacagatcagccagacacaaac
actaaacccgctgatccagacccagctgagatctggaagaaggacttccagtgccagtgg
tacaagactgcagatggggacgtctcggaccagcagtccccccaagatggagcgtcagtt
gtgggtacagtaaaagagaatgctggagatgtaatggggactataaccacttcagccata
gcttctacaacagcttttagaacaaaaggggcctctgtgattgagttgagaggaagcagt
tcacctggtactggaagtccatcgccttcactggaagtaactacagatggtggaacaaag
ccatggagtaccccaaacctgactgttctgctgttgctggtggctgtaagtgtatgcttg
gaacattaa
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