Etheostoma cragini (Arkansas darter): 117950752
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Entry
117950752 CDS
T07493
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117950752 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117950752 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117950752 (grin3bb)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Glutamate (ionotropic)
117950752 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
HAMP
Motif
Other DBs
NCBI-GeneID:
117950752
NCBI-ProteinID:
XP_034737981
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All DBs
Position
9:34631..63164
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AA seq
1127 aa
AA seq
DB search
MAAPLEVIVSCDSAAQMWNSTVFDLHSGSSLLSYRGGNSAARTLTVLRGEYLLSAQLGKN
FINVWEIQRKDLLHLDLLAQSLQVPFISILESGDTLDTQNRFHLQMAMGVPDSALSTLLL
AVFRRSGWLEGTVVLCRGWEEARGLLRRLDGNSRESWDGDGDSRASWDGGGDSRASWDGD
GDSRASWDSGGDSKASWDGGGNSRASWDGARPDWRIRTILNLTHSAYDDTQIHDFLSRHF
GQNPAMPPAPAAVLLFGAEPQCAAAVLRGAQALGLTLPMVHWVMGQPLRPDALHTIGLPP
GLLAYGEVERQPLDFYITDALTLVRRAVGAAATARPDLAVGQNLLSCHDAPAPGGQFLSR
FLSNTSFSGLTGPVRVHPNRSKVVTSQRFHIWSLGLDALGQPSWVTVGRWAAGRLTVEEQ
DVWRGPEPRRRPEGPAGTGRRRWRPGVPAAGSWVRVVTLVEHPFVFTRDVDAEGRCPAGQ
FCLDAGANASHTLETYFRDVEGGNSSLLPPDFSKCCYGYCVDLLEKLAEDLGFHFELYIV
ADGKYGAWKGGRWTGLVGDLLGGLADMAAASFSINSARSRVIDFTSPFFSTSLGILVRSK
DTAAPIGAFMWPLHWSMWVGIFAALHITALFLTLYEWKSPYGMTPHGRNRVRVFSYSSAL
NLCYAILFGRTVASKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGDKSFEEVLGI
HDAKLQHSSQGFRFGTVRESSAEDYMKKSFPDMHEYMRRFNEPTTPQGVAMLKVQYQVWY
GIGLPQNSPLTSNVSEFLSRYKSEGFMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSG
LFVLLCVGVGGALLTLAGEHAFYQLVLPRIRRRRKLQYWLHTSQKIHRALNMTYEDVKRQ
RADKDKSCNLEKCQPHPGPPGPPAPPVPEASAKWNNEAGKDAAPPAADARDFRRVHFHLE
TLNTRRLLARIATAEAKGEGPARPGAGTNSRPGEGAGPNSTLCENGGLAASLAGLVLSRQ
SSSARQSSPNTSAAGAPPPVAVEQSAAVEPPRPGELQELQEQINEMRDKLRTALARRAHI
QNSLNKPVVTVTDNVTTASGAPPTDAPPTGALPAGAPPTDTPPIGAR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctctggaggtgatcgtgagctgcgactccgcagcgcagatgtggaacagc
accgtgttcgacctgcacagcggctccagcctgctgtcgtaccggggcgggaacagcgct
gcccggaccctcaccgtgctccgcggggagtacctgctgtccgcgcagctgggcaagaac
ttcatcaatgtgtgggagatccagaggaaggacctgctgcacctggacctcctggcccag
tccctgcaggtcccgttcatcagcatcctggagagcggagacacacttgacacacagaac
cggttccacctgcagatggcgatgggagtcccagactccgccctgtcgacgctgctgctg
gcggtgttccggcgttctggatggctggagggaaccgtggttctgtgcaggggctgggag
gaggcccgcgggctgctgaggcggctggacggcaacagcagagaatcatgggacggtgac
ggtgacagcagagcatcatgggatggcggcggtgacagcagagcatcatgggacggtgac
ggtgacagcagagcctcatgggacagtggcggtgatagcaaagcatcatgggacggcggc
ggcaacagcagagcatcatgggacggcgccaggccggactggcgtatccgcaccatcctg
aacctgacgcattcggcctatgacgacacgcagatccacgacttcctgtcgcgccacttc
gggcagaacccggcaatgccgccggcgccagcggctgtgctgctgttcggcgccgagcca
cagtgtgcggcggcggtgctgcgcggcgcccaggccctgggcctcacgttacccatggtg
cactgggtgatgggccagccactgcggcccgacgcgctccataccattgggctcccaccg
ggcctgctggcctacggggaggtggagcgccagccgcttgacttctacatcacggacgct
ctgacgctggtcagacgcgctgtcggggccgctgccaccgccagaccagacctggcggtg
ggccagaacctgctgagctgccacgatgcaccggcgcccggcgggcagttcctgtccagg
tttctgtccaacacgtcgttctccgggctgaccggtccggtgcgagtgcaccctaaccgc
tccaaggtcgtgacctctcagcggttccacatctggagtctgggtctggatgccctgggc
cagcccagctgggttacggtgggccgctgggctgcgggccggctcaccgtggaggagcag
gacgtgtggcgcggccccgaaccccgtaggcgcccagagggcccggcggggaccggccgg
cggcgctggaggccgggcgtcccggcagcggggagctgggtgcgcgtggtcacgctggtg
gaacaccccttcgtctttacgcgggacgtggatgccgagggtcgctgccctgcagggcag
ttctgcctcgacgccggcgccaacgcctcccacaccctggagacatacttcagggatgtg
gaggggggcaacagcagcctcctgccccccgatttcagcaagtgttgctacgggtactgc
gtggacctgctggagaagctggccgaggacctgggcttccacttcgagctgtacattgtg
gccgacgggaagtacggcgcgtggaaggggggacgctggaccgggctggtgggggatctt
ctcggcgggcttgccgacatggccgccgcctccttcagcatcaactcggcgcgcagccgc
gtcatcgacttcacctcgcctttcttctccaccagcctgggcatcttggtgcgcagcaag
gacacggcggcgcccatcggcgccttcatgtggccgcttcactggtccatgtgggtgggc
atcttcgccgcgctgcacatcaccgcgctcttcctcacgctgtacgagtggaagagtcca
tacggcatgacgccgcacggccgcaaccgcgtccgggtgttctcgtactcgtcggcgctg
aacctgtgctacgccatcctgttcgggcgcaccgtcgcctccaagacgccgaagtgctgg
acgggccgcttcctgatgaacctgtgggccatcttctgcctgctggtgctgtccagctac
accgccaacctggccgccgtcatggtgggggacaagagctttgaggaggtgttggggatc
catgacgcaaagctgcagcactcgtcgcagggtttccgtttcgggacggtgagggagagc
agcgccgaggactacatgaagaagagtttccctgacatgcacgagtacatgaggcgcttc
aacgagccgaccacgccgcagggggtcgccatgcttaaggtccagtaccaggtgtggtac
gggatcggtctcccccagaactctcctctgacgtccaacgtctccgagttcctcagcagg
tataagtcggagggcttcatggatctgctgcacgacaagtggtacaaagtcgttccctgt
ggaaaccgcgtgttcgccgtcaccgagacgctccagatggggatcagccatttctcaggt
ctcttcgtgttattgtgtgttggcgttggcggcgctctgctgacgctggccggagaacac
gcgttctaccagctcgtcctgccgcgcatccgccgccgccgcaagctgcagtactggctg
cacacctcacagaagatccaccgagctctcaacatgacgtatgaagacgtgaagcggcag
cgagccgacaaagacaaaagctgtaacctggagaagtgtcagccccacccgggcccccca
gggccccccgcccccccggtacctgaagcctcggccaagtggaacaacgaggccggtaag
gacgccgccccccccgctgctgatgcccgggacttcaggcgagtccactttcacctggag
accctgaacacgcggcgcttgctcgctcgcatcgctactgctgaagccaagggggagggg
ccagccaggccaggggcggggactaacagcagaccgggtgaaggggcggggcctaacagc
acactgtgtgagaacggaggactggcggcatctctggccggcctggtgctgtcccgtcag
tcctcctccgcccggcagagttcacctaacacgtctgcggctggagccccgcccccggtg
gcagtggagcagtccgcggcggtggagccgccccggcctggcgagctgcaggagctgcag
gaacagatcaatgagatgagggacaaactgaggacggcgttagcccggagggcccacatc
cagaattctctgaacaaacctgttgtcacagtaacagacaatgtgacaacagcgtcagga
gccccgcccactgacgccccgcccactggcgcactgcctgctggagccccccccactgac
accccacccattggcgcccggtaa
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