Etheostoma cragini (Arkansas darter): 117952896
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Entry
117952896 CDS
T07493
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117952896
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117952896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
117952896
NCBI-ProteinID:
XP_034741393
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All DBs
Position
11:complement(5792233..5837440)
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AA seq
955 aa
AA seq
DB search
MYAGRKRRKPVQRAVKQAPTEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTASLDKLS
ILRLSVSYLRAKNFFSVALTGVTPAAGNEDDSKTAGSVETKIPEGELLLQALNGFVMVLT
ASGTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRRNLHWALNPPPATASVITQ
DSPQEMESDSSSSVVTYNPEQLPPENSSFLERSFVCRFRCLLDNSSGFLALNIQGRLKFL
HGQNQRQENGGKTPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPFACDAKGKI
VLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKENRWKWVQAN
ARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTYATGEALLYQSNHPIAVFRDE
GQEKNGSKSKKSRAERLVRDGLDPGSLLGALMSQDESVYVCQPDLEPKMSIHSFFGDQMG
FSDSEPTSLHRSWDEPSNGVLGPGITESGTSFDPLLATMDSLSLDGQAVWDSDEGGCSNS
ELFGALEGLGLSAEDLELLLLDERMIRIEMDPERVPSLDDLLTNDEILSYIYNSIEGRVD
STEHGGPVPPSTASAPAAIVSLPESNATSDSNVQMQFPPVGQAPIVKLSQQMQQHLSMQT
GKVVHDWGQQSNHLATTIVNGELKSFTSGQWSAQNILVTAGIQLEHFKTQPNIFNGKASE
LDGELHQQQIHQRYLQQQPRMQNHLSQQCQAKQKAANLNGLCGVSNTEHSAGKSLWQDYG
FSESLGNNACIDNGQKPLTNTSLDSCMDYNMPGVDIADYTASGSGLFGRSGPQHGDSTAP
SFQGIHHKQQQEQIPVPLAQVISSLSQCPPPNASLEQILGVGKPCRQLDAYGMVTSEIPH
DPSPNKMEDGCLLNSTYPGGCALPNRNGVEPPTVQMPSPETLSSLPDPPATGFYL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgggacgcaagaggagaaaaccggtccagagagcggtgaagcaggctccaacc
gaaggggccaagtccaacccgtccaaacggcatcgggacaggttgaacggtgagctggag
cgcttggccagcctgctgcctttccccgaggaggtcaccgccagtctggacaaactctcc
atcctccgcctgagtgtcagctacctgcgggccaagaacttcttctctgttgccctgacc
ggagtgactccagctgctgggaatgaagacgacagcaaaacagcaggatcggtggagacc
aagattcctgagggggaactgttgctgcaggctctcaacggttttgtcatggttctcact
gccagtggaaccatcttctactcctctcacaccatccaggactacttgggcttccaccag
acggatgtcatgcaccagagtgtgtacgagctggtccacacggaggaccaacaggagctc
aggagaaacttgcactgggctttgaatcctcctcctgccactgcatctgtcattacacag
gactccccccaagagatggaatcagacagcagctcatctgtagtcacctacaaccctgag
cagcttcccccggagaattcgtccttcctagagaggagctttgtgtgtcgcttccgctgc
ctgctggacaactcctccggctttctggctctgaacatccagggcagacttaagtttctg
catggacagaaccagcggcaagaaaacggaggaaagactccgcctcagctcgcccttttt
gccattgcgactcctctgcagcctccatctatcctggagatcaggaccaagaacatgatc
ttcagaaccaaacacaagctggacttcacacccttcgcctgtgatgcaaaggggaagata
gtgctggggtacacagaggctgagctgcgggtacgaggatctggttatcagtttatccat
gcagcagatatgttgtactgcgcagagaaccatgtcagaatgatgaagactggagagagt
ggtctgaccgtgttcaggctcctcaccaaggagaatcgctggaaatgggtccaggccaac
gccaggctggtgtacaagaacggcaaaccagactacatcattgccacccagaggcctctt
ttggatgaagagggaggagaacacttgcgtaagcgctccatgcatctaccctttacctat
gctacaggcgaggccctgctctaccagtccaaccatcctatagctgtctttagagatgaa
ggtcaagagaaaaatggcagtaagtcaaaaaagagccgtgctgaaaggctggtgagggat
ggtctggaccctggctctcttctgggagcacttatgagtcaggatgagtcggtgtatgtt
tgtcagccagacctggagcccaaaatgtcaatccatagcttctttggtgaccaaatgggc
ttctctgactcagaaccaaccagcttgcacaggagctgggacgagccgagcaatggcgtg
ctgggtccaggcatcacagagtcaggcaccagctttgatccgctgctggctactatggac
tccctctccctggacggtcaagccgtttgggattcggatgaggggggttgttcaaacagc
gagctgtttggagctctggaagggctgggcctgagtgccgaggacctggagctactgctg
ctggacgaacggatgatcagaattgagatggaccccgaacgtgtgcccagcttggacgac
ctgctgacaaacgatgagatcctctcatacatctacaactccatagaggggagggttgat
tcaaccgagcatggaggaccggtgcctccgagtactgcttcagcaccagccgcaatcgtg
tcgctacctgaaagtaatgccacttctgacagtaatgtgcaaatgcagtttcccccggtg
gggcaggctcccatcgttaagctgtcccagcagatgcaacagcatctcagcatgcaaaca
ggtaaagttgtgcatgactggggccagcagagcaaccatttggcaaccacgatagttaac
ggggagttgaaatccttcaccagtggacaatggtccgcccaaaacattctagtcactgca
gggatacaactggaacactttaaaacacaaccgaatattttcaacggcaaggcctcagag
ctggacggagagcttcatcagcagcaaattcatcagcgctacctgcagcagcaacccagg
atgcagaaccatctctcacagcagtgccaagccaaacagaaggcagccaacctcaacgga
ctgtgtggcgtctccaacactgagcattcggcagggaaatccctttggcaggactatgga
ttcagcgagagtctgggcaacaacgcctgcattgataacggccaaaaacctctaacaaac
acctcactagattcttgcatggattataacatgcctggtgttgacattgcggattacact
gccagtggaagcggtttgtttgggaggagtggaccgcagcacggggactccacagcgcca
tccttccaggggatacaccataaacagcaacaggagcagatcccagttcctttggctcaa
gtcatctccagcttgtcgcagtgcccaccccccaacgcctctctggagcagatcctgggg
gtaggcaagccctgccgacagttggacgcctatggcatggtgacctctgagattcctcat
gaccccagtcccaataagatggaggatggctgcctcctgaacagtacttacccaggaggc
tgtgctctgcctaatagaaatggagtggagccccctactgtccagatgccgagccctgag
actttgtccagcctcccagacccaccagccaccgggttctacctctga
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