Etheostoma cragini (Arkansas darter): 117955796
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Entry
117955796 CDS
T07493
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00780
Biotin metabolism
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117955796 (hlcs)
Enzymes [BR:
ecra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117955796 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117955796 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117955796 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117955796 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
117955796
NCBI-ProteinID:
XP_034746406
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All DBs
Position
13:complement(2505761..2542129)
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AA seq
935 aa
AA seq
DB search
MLITLCYVYLWVRFHKCYSVLIRNSLSRLNSSSFSFSFTVCSSPASAAATAAPTGRHTAA
AAATAAAPRRQPSPDQFEDSVFLQLGNKAVYVTEPQACDDLSKWTVLLGSSLLCGPRIEN
ISFIIEATGHRVGYHSPHTSNKKVLKWSDYCLPLACSPGQPFRAVAQASVDNFSRLGVAF
IEDRLQLDNGLLPSKIIPVLLQQSTLSELLAKQCPKTETSSLCLCGPQSGEGVAEPLRCR
LSPNHQHLQCRKGSLLLTPELKRRLGERRGSEPVRGTKDPGAVCDSEDHSLGNHHHMEGH
KHHLHLSSCHECLELENSTILSVKYASAENIPDLPNDNSVGLDSGDETLDDVEGFSGQGG
GFDCKSKPPNILLYTGGCPERFEALRQLLSECINMENNIIYPLQPQQALSDPWLDNTRLL
VLAEEETLTPQLQTRFLTYLSQGGRVLGLASTLCPAGLCLKVRERQRGKVSRLSFTREDS
TELELSVLASGMVYIRDTQGGGEVELWGELKGDIPHQRDMVIVRVTHRGDDGEAVLCQAH
LEIAPDSEQNLTSEGFDELKVSNALRFEVLTEILTSLGLNCEQNQTPAPSPVHLLATSQE
TKAIFLNWLQTRADQNGLLTLSKASLRMLSCSELQDGPSLPEGSLALVTNSSESQIWPQF
SMETYSKNLKTSLLGHTLLYADVVTSTMDLLQGLTLHLPKDVGLIAVAARQSQGRGRGKN
AWLGPLGCAMFTLAVQVELSSRLGRRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPND
IYYSHLMKLGGVLVTSTVLGSTFHLLIGCGVNVANSNPTMCINDLIQQYNTEHNRSLQPL
SCAQLIARSVSCLETLIGSFQQGGPDAILPTYYKRWLHSGTRVHLWSEDGLEAEVVGLDD
NGFLQVYNKEQGPVSVEPDGNSFDMLKNLVVIKKH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgttgtgctacgtctatctgtgggtgcgctttcacaagtgctactcggtg
ctgatccgcaacagcctgtccagactgaacagcagcagcttcagcttcagcttcaccgtg
tgctccagcccggcctcagcagcagccacagcagcgccgacgggacgccacacagccgcc
gccgccgccaccgccgccgccccccggaggcagcccagcccggaccaattcgaggacagc
gtcttccttcagctgggaaacaaggctgtctatgtcacggagcctcaggcatgtgacgac
ctcagcaaatggaccgtgctgttggggtcctctctgctttgtggtccacgaatagagaat
atttcattcatcatagaagctacaggacacagagtgggctaccattctcctcacacatca
aataagaaagtgctgaagtggtctgattactgtcttcctctggcctgtagccctggccag
ccattccgggctgtagctcaggccagtgtagataacttcagtcgtctgggggtggctttt
atcgaggatcgccttcagctggacaatggacttttgccttcaaagataatccctgtcctc
ctccagcaatccactctcagtgagctgttggcgaagcagtgtccaaagactgagacgtca
tcactctgtctctgtggcccccagtctggagagggtgttgctgagccgttgcgttgtcgg
ctgtcccctaatcaccagcacttgcagtgccgtaagggcagcctcctcctcaccccggag
ctaaagaggaggttaggggagcggcgagggtcagagccggtccgtggcaccaaggatccg
ggagctgtttgcgactcggaggaccattccctagggaatcatcaccacatggagggccac
aaacatcacctccatctgtccagctgccacgaatgcttggagctggagaacagcaccatc
ctctctgtcaaatatgcctcagctgagaacattccagaccttcccaatgataactcagtc
gggcttgatagtggagatgagactctggatgatgttgaagggttttctgggcaaggtggt
ggatttgactgtaaaagcaaaccgccaaacattctgctgtacacgggtggttgcccggag
cgttttgaggcgcttcgtcagcttttatccgagtgtataaacatggaaaacaacataata
tatcccctccaaccacagcaggctctgagcgacccttggctggacaacacccggctcctg
gtactggcagaggaggaaacccttaccccccaacttcagacccgtttcctcacctacctg
agccagggtggcagggtcctggggttagcctccaccctgtgccctgcaggcctctgtctg
aaagtcagggagaggcagcgtgggaaggtcagcaggctgagcttcaccagggaggacagc
accgagctggaactgagcgtgttggcgagtgggatggtctacatcagggatactcaggga
ggaggggaggtggagctctggggggagctgaaaggggacatccctcatcagagggacatg
gttatagtcagggtaacccacagaggggatgacggcgaagctgtcctctgtcaggcccac
ctggaaatagctcctgactcagagcagaacttgacatcagaaggttttgatgaactgaag
gtcagcaatgccctgcgttttgaggtcttgacagagatcctcacctcgctgggcctcaac
tgtgagcaaaaccagactccagcccccagcccagtccacctgctggccacctctcaggag
accaaggccatcttcctgaattggctgcagacacgtgcagatcaaaatggcctcctcaca
ttgtccaaggcctccctcaggatgctgtcctgttctgagctccaggacggtccttcgctg
cctgagggctccctggccctggtcaccaactcttcagagtcccagatctggccgcagttc
agtatggaaacctacagcaagaacctgaagaccagcctgctggggcacaccttgctgtac
gctgatgtggtcacgtctaccatggacctgctacaagggctgactctgcacttaccgaag
gatgtgggattaatagcggtggctgctcgacaaagccagggcagaggtcggggcaagaac
gcctggctcggccctctggggtgtgccatgttcactctggcggtccaggttgaactgagc
tcccggctcggacggaggattcccttcctgcagcatctggctgctctggccgtggtggag
gctgtccgcacactccctggataccaggacatagacctgagggtgaagtggcccaatgac
atctattacagtcacctgatgaagctcgggggggtactggtgacttccactgtactagga
tcaacttttcacctgctcataggctgtggggtcaacgtggccaacagcaacccaacaatg
tgtatcaatgacctgatccagcagtacaacacagagcacaaccgcagcctgcagccgctc
agctgcgcccagctcatcgctcgctctgtcagctgcctggagacgctcatcggcagcttc
caacaagggggcccggacgccatcctgcccacctactacaagaggtggctgcacagcggg
acccgggtgcatctctggagcgaggacggactggaggctgaggtggtgggtctggatgac
aacggcttcctccaagtgtacaacaaggagcaaggcccggtctcagtggagcctgatggg
aactccttcgacatgctgaagaaccttgtggtcatcaagaagcattag
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