Etheostoma cragini (Arkansas darter): 117958547
Help
Entry
117958547 CDS
T07493
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117958547 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117958547 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117958547 (grin2aa)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
Glutamate (ionotropic)
117958547 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117958547
NCBI-ProteinID:
XP_034750894
LinkDB
All DBs
Position
15:complement(5229435..5367735)
Genome browser
AA seq
1548 aa
AA seq
DB search
MKWFGSMSLSSKRSKRRSRRSSSCSSSSGSNSVLLSLALLVAVTLIADPVAAQKQRTGGA
SEKVPVLNIAVILGRTRYISERDIRALWSKEDPIDVNVVTLLVNETDPKSIITHVCDLVT
GTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASI
QQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKLTVDNSFVGWDLQNVIILDAVEE
DSRSQIMLKKVQSPVVLLYCSKDEAVYVLEEARSLGLTGFGYIWIVPSLTTGNPEVTPEE
FPPGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTFCYGPMEKTTKLP
PSALHKYMMNVTWDGRDLSFTEDGYQEYPKLVVIVLNKEREWEKMGKLDNRSLTLKYPVW
PRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGT
YIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVG
SLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTA
MAVFMFEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFI
VSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGST
ERNIRKNYPAMHQYMVKYHQTGVVDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTI
GSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSS
QLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSC
IHGVHIDMKKKSDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIMD
MMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANP
NTVEVAVSADSVQTNAKPPRTLWKKSVDTLRSGPPGPPPMPDMLMPDPRMSMKTQRYLPE
DAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSMTSKYPRDCSEVELSYLKTKQVTG
GTNQTGRGGGEKIYTIDSERELSLHSDPIHYRESRGLAADDLDYPEIYSDHSDNYRKCEQ
PIIHLNSSPLHHTDSDLLPDPTYSKHYSMKEKNIVLPPHESIDRYKQTHCRSCLSKVSAS
YPPGAPYTPAVPAAASATRSPYNRCEACLHTANLYDISEDQLLADPLVSPTRHHQQQQQP
DEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRFLD
STSDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSLRD
DTSSRLVHGRSSSDIYNQLAVASPAAPVGAPPIKTRNDANNLRSSVKSTTSYCSRDGRIA
NDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagtatgtccctcagcagcaaaaggagtaagaggaggagtagaagg
agcagcagttgcagcagtagcagtggtagtaatagtgtgctgctgtccttggctctcctg
gtggcggtgaccctgattgcggaccccgtggcggctcaaaagcagcgaactggcggtgcc
tcggaaaaagtgccggtcttgaacattgcggtgatcctgggacgcacacgctacatctca
gagcgggacattcgggcactgtggagcaaggaggaccccattgacgtcaacgtggtcaca
ctgctggtcaacgagaccgacccgaaaagcatcatcacccacgtgtgcgacctggtgacc
gggacaaagatccacggtgtggtgtttggggatggcaccgaccaggaggccatcgcccag
attttggattttatttcctcgcagacgctcatacccatcctgggcatccatggaggctcg
tccatgatcatggctgataaggatgtgaagtcgacattcttccagttcggtgcctccatc
cagcaggaggctctgctgatgctgaacatcatggaggagtatgactggcacatcttctcc
attgtcacatcaaagttccccggctatcaggagttcatcaacatcctaaaacttacagtg
gacaacagttttgtgggctgggacctgcagaatgtcattattctggacgcggtggaggaa
gacagccggtctcagatcatgctcaagaaggtccagtccccagtggtcttgctctactgt
tccaaggatgaggcggtgtacgtcctggaggaggctcgctctctgggcctcacgggattt
gggtacatctggattgtgccgtccctcaccactgggaacccggaagtaacacccgaagag
tttccgccggggatgatttcagtgtcatacgacgactgggactacccgctggaggcgcga
gttcgggatggtctggggatcataacgtcagcagcggcagccatgttggaggagtatggt
gacatccccgaagcgaagacattctgttacggcccgatggagaagacaaccaagctgcca
cccagtgcactacacaaatacatgatgaacgtgacatgggatggcagagacttgtcattc
acagaagacggctaccaggaatacccaaagctggtggtcatcgttctcaacaaggaaaga
gagtgggagaagatggggaaactggacaaccgcagcctgacacttaagtacccagtgtgg
ccgcgcttcaactccttcggtgatgccgagctcgatgacaaccacctgtccatcgtcacg
ttagaggagaaaccttttgttatagtggaggacgtagaaaggctcaccggtacctgcatg
aggaactccgtgccctgcaggaagcacatcaaagacaacacaacagaggctggtgggaca
tacatcaagaagtgctgcaagggtttctgcatcgatattctgaaaaagattgccaagtat
gtgaagttcacctatgacctgtacctggtaaccaatggcaagcatggcaagaagatcaac
aatgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcgga
tctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaa
actgggatcagcgtcatggtctcccgtagcaacggaacggtctccccgtcagcctttcta
gagccattcagcgcatcagtgtgggtgatgatgtttgtgatgctcctactggtgactgca
atggctgtctttatgtttgaatacatcagtcctcttggctttaacagaaacctggcgcag
ggaagagaccctcatggcccttcctttaccatgggcaaggctgtttggctgctgtggggt
ctggtcttcaacaattctgtgccagtgcagaaccctaaaggaactaccagtaagttcata
gtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggct
gccttcatgatccaggaggagtttgttgatcaagtcaccgggctttccgacaacaagttt
cagaacccgtatgcatactcgcctccgttccgcttcgggacggttccaaacggatccaca
gagaggaacatcaggaagaactaccccgctatgcaccagtacatggtaaaatatcatcaa
accggagtcgtggacgcacttgtcagcctcaaaacggggaaactggatgccttcatctat
gatgctgcagtgttgaactacatggccggcagagatgagggatgtaagctggtgaccatt
ggcagcgggtacatctttgctaccaccggttacggcattgctctacagaaaggctcctat
tggaaacgacaggtggatctggctatcctggccatcatcggagacggtgaaatggaggaa
ctagaagcccagtggctgacaggaatttgccacaacgagaagaatgaggtgatgtccagt
cagcttgatgtggacaacatggctggggtcttctacatgctggccacggccatgggactc
tctctcatcacctttgtgtctgagcatcttttctattggaggctcagatattgcttcact
ggggtttgcaccggcacaccaggtcttctcttctccatcagtcggggaatctggagttgc
atccatggagtccacattgatatgaagaaaaaatctgatctggactttagccctcaggac
aaaatgcttaagctcattaaatcagcaaaacagatgaccaacatgtctaacctgagtggt
tcccgcatgaactcacccaaacgtgagttcatgcactcagcaggtccaatgatcatggac
atgatggcagagaagggcaactttatctatgctgacaaccgaagctatgctcccaaagat
atgatctatggggacactggtgacctgcagtcctatctcgctaaccgccacaaagaccac
cttaacaactacatcttccagggtggccagcatcctttgaccctaaatgatgccaatccc
aacacagtagaggtggcagtgagtgctgactcagtccagaccaatgccaagccgcccagg
accctgtggaagaagtcagtggacacgcttcgttcagggcctcctgggccccctccgatg
cctgacatgctgatgccagacccacgaatgtcaatgaagacacagcgctacctccctgag
gacgcagcccactctgatatctccgactgttccagcagagcagcctcctacaaagaccca
gaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaagatcaatgacgtcaaaa
tacccaagggattgcagtgaggtagagttgtcctacttaaaaactaagcaggtcaccggt
ggaaccaaccaaactgggagaggaggaggagagaaaatttacactatcgactcagagaga
gagctgagcctacactcagaccccattcactatcgtgagagtcgcggccttgctgcagac
gatttggattatcccgagatctactctgaccacagtgacaactataggaagtgtgagcag
cccatcattcatctgaactcctcgcctttgcatcacaccgattcagatcttctaccagac
ccaacttactctaaacactacagcatgaaagagaaaaacattgtcctgccccctcatgaa
tccattgaccgctataaacagacacactgtcgttcctgcttgtcaaaagtgagtgctagc
tacccaccgggagcgccatacactcctgctgtacctgcggcagcttctgccacacgctca
ccctataatcggtgtgaagcatgcctccacacagccaacctgtatgacattagtgaggac
cagctccttgcagaccccttggttagtcccaccaggcaccaccaacagcagcagcaacca
gatgaaatgtttggtctgtattggccacagacagatgggccacatgttcaaaagagaaac
cgcttgaggctgagtcgtcagcactcctttgacaacatcatgcttgaaaagcccaaggat
gtagacctgggccgaccggcacgcagtgtcagcctcaaggagaaagatcgcttcttggac
tccacatctgactcgcactatgcgaacctcttcggcatgcgtccctactctggcagactg
tttggcaccgggtccaaatcaatgctctttaaccacaacctggaggagagcaagaggagc
aagtccctgtacccggcccatggctcggaaaaccctttcctcagccactcgctgagggat
gacaccagcagcagactggtccatgggcgtagctcctctgatatttacaatcagctggcg
gtggcctcacctgcagcgcccgtcggagcaccccccatcaaaacacgcaatgatgcgaac
aatctccgctcttccgttaaatccaccacttcatactgctcacgggatgggaggatagcc
aatgacatgtacaataaagagcatgtgatgccttactcagccaacaagactagtgcatac
ccggccccacgtggcgtcctaaactcagcccagttcagcaacagacgggtgtataaaaaa
atccccagtctggagtcagatgtttag
DBGET
integrated database retrieval system
