Etheostoma cragini (Arkansas darter): 117960923
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Entry
117960923 CDS
T07493
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117960923 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117960923 (polr1b)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117960923 (polr1b)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117960923 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
117960923
NCBI-ProteinID:
XP_034755123
LinkDB
All DBs
Position
17:21572960..21584366
Genome browser
AA seq
1138 aa
AA seq
DB search
MSASMSSSTKWNNLPKGPSLKNLTEGGFGVLKESQHAAVQDLTKAHIESFDQAVTDGLSR
VVQSIPPLEFTFKEDRISLAFVEATLYNPVVAKGSICRELKVFPAECRGRKCTYKGKLVA
DVSWSVNGVPKGIIKQSMGQVPIMVKSKMCNLHGMSPKELVKHHEEAEEMGGYFIVNGNE
KVIRMLIMPRRNYPIAMSRPKWKSRGQGYTQFGVSMRCVKEEHTAVNMNLHYLENGTVML
NFIYQKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCASEMLRVVMEEGCTT
RAKVLNYLGERFRVKMSLPEWYTNEQCANYLLDECICIHLKSDVEKFYLLCLMTRKLFTF
AKQECMEENPDSIMCQEVLTPGQLYLMFMKERMAAWLLSVKLSFDKRGSRLTGRLSAENV
MKIFNMGTDLTKPFEYLLATGNLTSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGA
AFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPSLPTTSLPALLCS
LGVTPVDGSPGQAFSDCFPVVLDGAVLGWVETELAPLVVNSLRRFKVLKEKKIPPWTEIV
LVPKTGKASLYPGLFLFTTPCRMVRPVHNLALGKQELIGTFEQLYINVGIMEDEIEPGVT
THQELFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQT
PQSPLVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKT
ELVDLAEKVRGEDSVVFGTKPGDPKVNNKLDADGLPFIGSTLQYGDPFYSYINLNTDQTF
VNFYKSQEACVVDNIKICSNDTGSGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRMW
PAEDMPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESS
ALEYFGEMLRAGGYNFYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGA
RDKVTNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLL
SPLLEKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagcatgagctcttcaacaaagtggaacaatttgcccaaaggtccgagtcta
aagaatctaacagagggaggatttggtgtcctgaaggagtcccaacatgccgctgttcag
gatttaacaaaagctcacatcgagtcgtttgaccaggctgtcactgacggactcagccgc
gttgtgcagtccatcccccctttggagttcacattcaaagaggacaggatcagccttgcc
tttgttgaggccacgctctacaacccagtggtcgccaaagggagcatctgcagggaattg
aaggtgtttccagcagagtgcaggggccgaaaatgtacttacaaaggaaagctggtggcg
gacgtcagctggtcagtcaacggggttcccaaaggcatcatcaaacagtccatgggtcag
gtgcccatcatggtgaagtccaagatgtgtaacctgcacggcatgtcccccaaagagctt
gttaaacaccacgaagaagcagaggaaatgggaggttattttattgtgaatggaaatgag
aaggttatccgtatgctgataatgccaaggaggaactatcctattgccatgtcaagaccg
aaatggaagagcaggggccagggatacactcagtttggtgtttcaatgcgttgcgtgaag
gaagaacacacagccgtcaacatgaacctgcattatctggaaaacgggaccgtaatgctg
aactttatctaccagaaagagctcttcttcctcccattgggctttgcacttaaggcgttg
gtggacttcacagacttccagatctatcaggagctgatcaagggccgcgaggacaactcc
ttctataagagctgtgcgtcggagatgctgcgcgtcgtcatggaggagggttgcaccacc
cgcgctaaggtgctcaactacctgggagagcgcttcagggtcaagatgagccttcccgag
tggtacacaaacgagcagtgcgccaactacctgctggacgagtgcatctgtatccacctc
aagtccgatgtggagaagttctacctcctgtgtctgatgacccggaagctcttcacgttt
gccaagcaggagtgcatggaggagaacccggacagcatcatgtgtcaagaggtgctcact
cccggtcagctctatctcatgttcatgaaggagagaatggctgcctggttgctgtctgta
aagctgtcctttgacaagcgaggcagcagactgactggaagactgagcgctgaaaacgtg
atgaagatattcaacatgggcactgacctgaccaaaccctttgaatatctgctggccact
gggaacctcacctccaagacaggtctcggcatgcttcagaacacaggcctgtgtgtggta
gctgacaagctcaacttcatccgctacctgtcccacttccgctgcgtgcacagaggagct
gccttcgccaagatgaggaccacctctgtccgcaagctgctgcccgagtcctggggcttc
ctgtgtcctgtccacactccggacggagagccctgtggactcatgaaccacatgacggcc
atctgtgagattgtggccccaagcttgcccaccacatccctgccggctctgctctgctcc
cttggcgttactccagtggatggatctccaggccaagccttttccgactgcttccccgtg
gtcctggacggcgctgtgttaggctgggtggagacggaattagccccgcttgtggtcaat
tcactgcgcaggttcaaggtgctaaaagagaagaagatccctccctggactgagatcgtt
ctggttccaaaaaccggcaaggccagtctgtacccaggcctgttcctctttacaaccccc
tgccgcatggtgcggcccgtacacaacttagctcttggcaagcaggagttgatcggcacc
tttgaacaactttacatcaatgtaggcatcatggaggatgagatcgaaccaggagtgacc
acacaccaggagctcttccctcacagtatgctgagcgtggtggctaactttattccctac
tcggaccacaaccagagtcctaggaacatgtaccagtgtcagatgggtaagcagacgatg
ggcttccccctgcactccttcatggaccgctccgataacaagctgtaccggctgcagacc
ccgcagagcccactggtgcgcccctacatgtatgaccactacaacctggacaactacccc
agcggaacaaacgccatcgttgctgtcatatcctacacaggctacgacatggaagatgcc
atgattgtgaacaagtcgtcatgggagaggggctttgcccacggaagtatctacaagaca
gagctagtggacttggcagaaaaggtgcggggagaagacagtgtggtgtttggtaccaag
ccaggtgaccccaaggtaaacaacaaactggacgccgatggactgccattcattggctca
acacttcagtacggggaccccttctacagctacatcaacctcaacaccgatcagaccttc
gtcaacttctacaagagtcaagaggcctgcgttgtggacaatattaagatctgcagcaac
gacactggctcgggccgtttcaaacgtgtctgtatcaccatgcgagtgccacgtaacccc
accatcggggacaagttcgccagtcgccacggtcagaagggaatcctgagccgcatgtgg
ccggcagaggacatgcccttcacagagagcggcatggcccccgacatcctgttcaacccg
cacggcttcccctcccgcatgaccatcgggatgctgatcgagagcatggccggtaagtca
ggcgccctgcacggactgagccacgatgccacgcccttcaccttctccgaggagagctcg
gcgctcgagtactttggcgaaatgctccgggcaggcggatacaacttctacggcacggag
cggctctacagtggagtgagcggcctggagctggaggccgacatatttatcggagttgtc
tactaccagcggctgcgtcacatggtgtcagacaagttccaggtgaggaccacaggagcg
cgggacaaggtgaccaaccagcccgtgggaggcaggaacatccagggaggcatccgtttt
ggggagatggagcgagacgccctgctagcccacggctcatcattcctgcttcacgatcgc
ctctttaactgctcggaccgatccgtggctcaggtgtgcgtcgactgtggcagcctgctc
tcccctctgttagagaaaccaccaccctactggtcggccatgcgccaccgcaagactgtc
tgcactctgtgtggtaaaagcgactctatagactcggtgtctgtcccttatgtgttccgc
tactttgtagccgagctcgcagcaatgaacatcaaagtcaaattagacgttaagtga
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