Etheostoma cragini (Arkansas darter): 117961534
Help
Entry
117961534 CDS
T07493
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117961534 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117961534 (esr1)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
117961534 (esr1)
Nuclear receptors [BR:
ecra03310
]
3. Estrogen like
3A. Estrogen receptor
117961534 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117961534
NCBI-ProteinID:
XP_034756180
LinkDB
All DBs
Position
18:complement(9170357..9181388)
Genome browser
AA seq
623 aa
AA seq
DB search
MLLRQSPAQSRQPCGPVLRPRISPAFSELETLSPQRPSPPPRALSSDMYPEESRGSGGVA
TVDFLEGTYDYAAPTPAPTPLYSHFTTGYYSAPLDAHGPPSDGSQSLGSGPTSPLVFVPS
SPRFSPFVHPPSHHYFETSSTPIYRSSVPSSQQSVSTEDQYNNSDESYSVGESGAGAGAG
GFEIVKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRR
KSCQACRLRKCYEVGMMKGGVRKDRGRVLRRDKRRTGTNDRDKASKDLAHRTVPPQDGRK
RSSACGGGGKLLLTSMSPDQVLLLLQGAEPPILCSHQKLNRPYTEVTMMTLLTSMADKEL
VHMIAWAKKLPGFLQLGLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNE
GDCVEGMAEIFDMLLATASRFRLLKLKPEEFVCLKAIILLNSGAFYFCTGTMEPLHDAAA
VQNMLDTITDALIHHISQSGCSVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSIKCKNKV
PLYDLLLEMLDAHHVQRPDRPDQPWSQADGELPSTISNTSNSSGGGSSSGGCSSGPRMSR
ESPCRAPTVLQYGGSRSDCTRIL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcagacagagcccggcacagagcaggcagccttgtggaccagtcctcagaccc
aggatcagcccagccttctcagaactggagaccctctccccacaacgtccctcacctcca
cctcgtgccctctccagtgacatgtaccctgaagagagtcgggggtctggaggggtagcc
accgtggacttcctggaagggacatacgactatgctgcccccacccctgctccgactcct
ctttacagccactttaccactggctactactctgctcctttagacgcccacggaccacct
tcagatggcagccagtccctgggtagtgggcctaccagtcctcttgtgtttgtgccctcc
agcccccgattcagcccctttgtccacccacccagccaccactattttgaaacctcatca
acacccatttacaggtccagtgtcccatccagtcagcagtctgtttccacggaggaccaa
tacaacaacagtgacgagtcatacagtgtcggggaatcaggagctggagccggggctggg
gggttcgagattgtcaaagagacgcgtttctgtgccgtgtgcagtgactatgcctctggg
taccattatggggtgtggtcctgtgagggctgcaaagccttctttaagaggagcatccag
ggtcacaatgactatatgtgcccagcaaccaatcagtgtactattgacagaaatcggagg
aagagctgccaggcttgccgccttaggaagtgttacgaagttggcatgatgaaaggaggt
gtgcgcaaggaccgcgggcgcgtgctgcggcgtgacaaacgacggactggcaccaatgac
agagacaaggcctctaaggacctggcgcacaggacagtgccccctcaagacgggaggaaa
cgcagtagtgcttgtggtggaggaggaaaattattgctgactagcatgtctcctgaccag
gtgctcctccttctgcagggtgccgagcccccaattctgtgctcccatcagaagctaaac
cgaccctatactgaggtcaccatgatgaccctgctcaccagcatggctgataaggagctg
gtccacatgattgcatgggccaagaagcttccaggtttcctgcagctgggcctccatgac
caggtacagctgctggagagctcatggctggaggtgctgatgatcgggctcatctggagg
tctatccactgccccggcaaactcatcttcgcacaggacctcatactggacaggaacgaa
ggcgattgtgtcgaaggcatggctgagatcttcgacatgctgctagccaccgcttcccgc
ttccgcctgctcaaactgaagccggaggagtttgtctgtctcaaagctattatcttgctc
aactctggagccttctatttctgcaccggtacaatggagccgctccacgacgctgcggca
gtgcagaacatgctggacaccatcacagacgctctcatacatcacatcagccagtcagga
tgctcagttcagcagcagtcgagacggcaggcacagctgctcctcctgctctcccacatc
aggcacatgagcaacaaaggcatggagcatctctacagcattaagtgcaagaacaaagtg
cctctgtacgacctgctgctggagatgctggatgctcaccacgtccagcggccagacaga
ccagatcagccctggtcccaggctgatggagagcttccctccaccatcagcaacaccagc
aacagcagtggcggcggctcctcttcaggtggatgcagttcaggaccccgaatgagccgt
gagagcccgtgcagagcccccacagtcctgcagtacggagggtcccgctctgactgcacc
cgcatcctatga
DBGET
integrated database retrieval system
