Encephalitozoon cuniculi: ECU05_1130
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Entry
ECU05_1130 CDS
T00105
Name
(RefSeq) pre-mRNA cleavage GTPase subunit
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ECU05_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecu03019
]
ECU05_1130
Enzymes [BR:
ecu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
ECU05_1130
Messenger RNA biogenesis [BR:
ecu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
ECU05_1130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
Pirin_C
RHH_3
Motif
Other DBs
NCBI-GeneID:
859122
NCBI-ProteinID:
NP_597456
UniProt:
Q8SVI2
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All DBs
Position
V:148189..149310
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AA seq
373 aa
AA seq
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MEIRLQPNQEFRIEVNETQKLKVMVVSGLAEIKGQELLNERWYAFRNTKTFIFTFSGCKL
KVEGACDLQYVSDTTNVPLIFNILSFFSKRGFDYSKLKTFMVVGNGRSTFCFTLINFFVR
LGKKVLFTEVDPSKGNIFPGALSTIHVDALIDCIEGLRLKNPLSFYYGSTEITNMELYDL
QTTKLQEAIKAKNVEDLHLILCPEGTSAFYNTLIKRFEVDRVVVVGDERLYHSLDVIAEK
LMINRSGFVEEKEVGRSISRYFKGVNNEYTPFTFNVKYKWRVVRIGEMYVAPVSALPLGS
TRKVGCVEASDVEVAENSVLGISEAREIEDVAGSPVLGYVVVINAGAFKILCTQPRLPKY
TFLVQGDLKHVEY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagatacggcttcagccaaaccaggagttcagaattgaagtcaacgagactcagaaa
ctgaaagtgatggttgtgtcgggcctcgcagagatcaaggggcaggagcttcttaacgaa
aggtggtatgcattcaggaacacaaagacattcatattcacgttttctgggtgcaaactc
aaggtcgagggtgcctgcgatctccagtatgtgtccgacacaacgaatgtcccattgata
ttcaacatcctcagcttcttttccaagaggggatttgactacagcaagcttaagacattc
atggtagtgggaaacgggagatctacgttttgcttcacgctaatcaacttctttgtgcgc
ctgggcaagaaggtgctgttcacagaggtggatccgtcgaagggaaacatatttcctggc
gccctgagcacaatacatgtggatgccttaatagactgcattgaagggctccggctaaag
aatcccctgtccttctactacggatccacagagataacaaacatggaactatatgacctc
cagacaaccaagctgcaagaagccataaaggccaagaatgtagaggaccttcacctgata
ctctgtcccgaaggcacgtctgcgttttataacacattaataaagagatttgaggttgat
agagttgttgttgtgggagacgaaagactgtaccactcattggatgtgatagcagagaag
ctgatgataaacaggagcggttttgttgaagagaaagaggtcggaagaagcatatctagg
tacttcaagggtgtcaataacgagtacacaccctttacattcaacgtgaagtacaagtgg
agggttgtaaggataggagagatgtatgttgcacctgttagtgccctgccgttgggaagt
acaaggaaggttgggtgtgtggaggcctcagacgtggaggttgctgagaattctgttctg
gggatttccgaggctagggagatagaggatgttgccgggtctcccgttcttggatatgtg
gttgtcatcaatgcaggtgcattcaagatactgtgtacccagccgaggcttccgaaatac
accttcctggtccagggggatcttaagcatgtcgagtattag
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