KEGG   Encephalitozoon cuniculi: ECU11_1400
Entry
ECU11_1400        CDS       T00105                                 
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ecu  Encephalitozoon cuniculi
Pathway
ecu03020  RNA polymerase
ecu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ecu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ECU11_1400
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECU11_1400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecu03021]
    ECU11_1400
   03400 DNA repair and recombination proteins [BR:ecu03400]
    ECU11_1400
Transcription machinery [BR:ecu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     ECU11_1400
DNA repair and recombination proteins [BR:ecu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ECU11_1400
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Rpr2
Other DBs
NCBI-GeneID: 860100
NCBI-ProteinID: NP_586446
UniProt: Q8SQU1
LinkDB
Position
XI:177997..178323
AA seq 108 aa
MSDRFCKECNNLLYPKEDDNTLFLACKNCEHIQEAKSHRLYVKNFRPKHASIELYARDLV
QDPTLPSVKINCGNCGFNKGLYFQPRGGEEDVALSIFYLCCRCYHLWT
NT seq 327 nt   +upstreamnt  +downstreamnt
atgagcgaccgcttctgcaaggagtgcaacaacctcctctatccaaaggaagacgacaac
accctgttccttgcatgcaaaaactgcgagcacattcaggaggcaaagtcgcaccgcctc
tatgtgaaaaactttaggcccaagcatgcgtcaatagagctgtatgccagggatcttgtg
caggatccaacgcttccatcggtgaaaatcaactgtgggaactgcggattcaacaaggga
ttgtacttccagcccaggggtggagaggaagacgttgcattgagcatcttctatctgtgc
tgtagatgctatcacctgtggacataa

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