Escherichia coli DH1: ECDH1ME8569_1436
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Entry
ECDH1ME8569_1436 CDS
T02102
Symbol
gadB
Name
(GenBank) glutamate decarboxylase beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
edj
Escherichia coli DH1
Pathway
edj00250
Alanine, aspartate and glutamate metabolism
edj00410
beta-Alanine metabolism
edj00430
Taurine and hypotaurine metabolism
edj00650
Butanoate metabolism
edj01100
Metabolic pathways
edj01110
Biosynthesis of secondary metabolites
edj01120
Microbial metabolism in diverse environments
edj02024
Quorum sensing
Module
edj_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECDH1ME8569_1436 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECDH1ME8569_1436 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ECDH1ME8569_1436 (gadB)
00430 Taurine and hypotaurine metabolism
ECDH1ME8569_1436 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECDH1ME8569_1436 (gadB)
Enzymes [BR:
edj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
ECDH1ME8569_1436 (gadB)
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Ortholog
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BAJ43292
LinkDB
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Position
complement(1552827..1554227)
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AA seq
466 aa
AA seq
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MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL
ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG
TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI
PMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDM
HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELV
FNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL
GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVV
MRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagcaagtaacggatttaaggtcggaactactcgattcacgttttggtgcg
aagtctatttccactatcgcagaatcaaaacgttttccgctgcacgaaatgcgcgacgat
gtcgcattccagattatcaatgacgaattatatcttgatggcaacgctcgtcagaacctg
gccactttctgccagacctgggacgacgaaaatgtccacaaattgatggatttatccatt
aacaaaaactggatcgacaaagaagaatatccgcaatccgcagccatcgacctgcgttgc
gtaaatatggttgccgatctgtggcatgcgcctgcgccgaaaaatggtcaggccgttggc
accaacaccattggttcttccgaggcctgtatgctcggcgggatggcgatgaaatggcgt
tggcgcaagcgtatggaagctgcaggcaaaccaacggataaaccaaacctggtgtgcggt
ccggtacaaatctgctggcataaattcgcccgctactgggatgtggagctgcgtgagatc
cctatgcgccccggtcagttgtttatggacccgaaacgcatgattgaagcctgtgacgaa
aacaccatcggcgtggtgccgactttcggcgtgacctacactggtaactatgagttccca
caaccgctgcacgatgcgctggataaattccaggccgataccggtatcgacatcgacatg
cacatcgacgctgccagcggtggcttcctggcaccgttcgtcgccccggatatcgtctgg
gacttccgcctgccgcgtgtgaaatcgatcagtgcttcaggccataaattcggtctggct
ccgctgggctgcggctgggttatctggcgtgacgaagaagcgctgccgcaggaactggtg
ttcaacgttgactacctgggtggtcaaattggtacttttgccatcaacttctcccgcccg
gcgggtcaggtaattgcacagtactatgaattcctgcgcctcggtcgtgaaggctatacc
aaagtacagaacgcctcttaccaggttgccgcttatctggcggatgaaatcgccaaactg
gggccgtatgagttcatctgtacgggtcgcccggacgaaggcatcccggcggtttgcttc
aaactgaaagatggtgaagatccgggatacaccctgtatgacctctctgaacgtctgcgt
ctgcgcggctggcaggttccggccttcactctcggcggtgaagccaccgacatcgtggtg
atgcgcattatgtgtcgtcgcggcttcgaaatggactttgctgaactgttgctggaagac
tacaaagcctccctgaaatatctcagcgatcacccgaaactgcagggtattgcccaacag
aacagctttaaacatacctga
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