Electrophorus electricus (electric eel): 113576535
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Entry
113576535 CDS
T05787
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113576535 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113576535 (polr1a)
Enzymes [BR:
eee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113576535 (polr1a)
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113576535 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
BUD22
Motif
Other DBs
NCBI-GeneID:
113576535
NCBI-ProteinID:
XP_026864448
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MLFLKETPWRRLEGMSFGMYSPDEIRKLSVKSVTNTMILDNVGNSAPSGLYDLSLGPADH
KEICSTCMQDFNHCPGHFGHINLHLPVYNPFLFDKLYMIVRGSCLSCQMLTCPRAAIHLL
LYQLKLLDVGAMKEVYELEIALSQFLEGNPQASGAEIQEALEEFSAPIIRGNQSSCNHAP
MKNVCEIKNSLIGNFWKIHMGSRKCLNCKAVKAQVRREHNSKLIVTRMVCKDGKEEEADD
VHMGKRGYLTPSLAREHVLKLWEKEGFFLKHLFSGLAVNSPDMFFLELLLVPPCRYRPIN
RLGDQMFTNGQTVNMQAVIKDNIIIQKLLALIAAEAQKVDCTQTELEEPTETAKTSQMDH
MFLASLPGVALTDKLYNVWIRLQSHVNVVFDSDLDKLMTEKFPGIRQLFEKKDGLFRKHM
MGKRVDYAARSVICPDMYIGTNEIGIPIVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GASMVINEDGSRTILSSTNPTQREAIAKQLLTPSTGQHRMPMKIVNRHIKNGDVLLLNRQ
PTLHRPSIQAHVAHVLPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYMLVS
TDHQYLVPKDGKPLAGLIQDHIVSGTSMTIRDCFFKQDQYMELVYRGLTDKKGRVKLLSP
ALLKPQRLWTGKQVVSTLLLNIIPENCIPLNLMGKAKIPSKAWVKEHPRFVPGYKSDSMC
DSQVVIRYGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYR
GFTMSVEDILVNHGANKQRKMIIKGSVKCGAKALRAAFNLPESTNESECRDLWQNAHLNV
DQRHFDMVELKFKEEVNQVSNNINKVCMPLGLHRSFPENSLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPMMPSGKSLPCFQPYDPEPHSGGFVSGRFLTGIKPPEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCVIKHLEGLVVHYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
LRQLPFIKNNSEAIRKSQCLEKVLVKLDHLVAENHFRNIKKWKAKHAHVSPRDGGFLRFS
KKNLNKMKARGEAHTEDLINGRDAATLHLQDKWRTMHDSCRAKYMKKTSRCPDPCIAVFR
PDICFGSVSETFDSLIDSYLTQFNIKQEFLTLPETLNCEKLRHLLQLKWQRALCEPGEAV
GLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASSNIKTPMMSIPVLSN
KKAMKQVKTLRKQLTRVCLAEVLHKVDVVETLRMKGKRSQKKRVFRITFQFLPPERYQQE
KLLSPQQILRFVEDKFFRLLLEAIKKLSAKLASINTVDTRKATTKDTDPDTEDSSARAVD
DRDTEEDRVVDDEANEGDADASDAKRREKQEEEVDYDSEEGEDSGDEEQEEAAEELEEQV
GSEGPSEEKLCRAPLSEPSSFSNQEYEANATQESGRVNRVLQLSSSIEHYKYDHKNGLSC
EITLVLPVSKVHFDLTSLVVAQAQNAVLMETKGITRCLLNEMSNKHGVNELVLNTEGINM
QELFRHGNILDLNRLYSNEIHAMANTYGIEVALRVIEKEIKDVFAVYGIEVDPRHLSLVA
DYMCFEGVYKPLNRYGIQSNSSPLQQMSFETSYKFLKQAATLGMNT
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttaaaggaaacgccatggaggcgattggaaggcatgtcatttggcatgtac
tctcccgacgaaataaggaaattgagtgtcaaaagtgtcaccaataccatgatactggat
aatgtcggtaactcggcacccagtggactttacgacttgtccctgggaccggctgatcac
aaagaaatctgttcaacgtgcatgcaggatttcaaccattgcccaggacactttggacac
ataaacttgcacttacctgtctataaccctttcttatttgataaattgtacatgattgtg
cgaggttcctgtctgtcatgccaaatgttgacatgtccaagggctgccattcacttgctt
ctgtaccaactcaagttattagatgtaggagcaatgaaggaagtctatgaacttgagatt
gctctcagtcagtttttagaaggtaacccacaggcatcaggagcggaaattcaggaagct
ttggaggaattcagtgcacctattatcagaggaaaccaaagcagctgcaaccatgcacct
atgaagaatgtttgcgagataaaaaacagtcttattggtaacttttggaagatccacatg
ggttcaagaaaatgtctcaactgcaaggctgtcaaagcacaagtacgcagagaacacaac
agtaaactgattgtcacacgtatggtttgcaaagatggtaaagaagaagaagcagatgat
gttcacatgggtaaacgtgggtacctgactccaagcttggcccgagaacatgtcctcaaa
ctgtgggaaaaagagggtttcttcctgaagcacttattctcaggcctggctgtgaacagc
ccagatatgttcttcctagaattgttattggttcctccatgcaggtatcgtcccattaat
cgtctgggagaccaaatgttcaccaatggccagacagtgaacatgcaggcagtgatcaaa
gataatatcatcattcagaaactgcttgctctcatcgcagcagaggctcaaaaggtagac
tgtactcagacagagctggaggagcccacagaaacagcaaagaccagccagatggaccac
atgtttttagccagcctgcctggagtcgccctcacagataaactttataacgtctggatc
cgcctgcagagtcacgtcaatgttgtgtttgacagcgatttggacaagctaatgactgaa
aaatttcctggaatccgccagctcttcgagaagaaggacggtctattcaggaagcatatg
atgggcaagagagtggactatgccgctcgctctgtcatctgtcctgacatgtacatcgga
acaaatgagatcggaatacccatagtgtttgccaccaaactgacatacccacagccggtc
acaccctggaatgtgaaggagctacggcaggctgtgctcaatgggccaaatgtgcacccg
ggagcctccatggtgattaatgaggatggctcacgtactatcctaagcagcactaaccca
acccagagggaggccattgccaagcagctcttaacacccagtacaggccagcatcgcatg
cccatgaaaattgtaaatcgtcatatcaaaaatggtgatgtgctcctcctgaatcgacaa
cccacattgcaccggccatccatccaggcacacgtggcccatgtactgcctggggagaaa
gtgctacggttgcactacgccaattgcaaggcctacaatgctgactttgacggagacgag
atgaatgcgcactttccgcagagtgaactgggtcgtgctgaggcctacatgcttgtcagt
actgaccatcagtacctggtacccaaggatgggaagcccttggccggtctaattcaggat
cacattgtgtcaggtaccagcatgaccatacgggactgctttttcaagcaggatcagtat
atggagctggtctacagaggcctcactgacaaaaagggcagagtcaagctgctttctcct
gctctcctcaagccccaaagactttggaccggcaaacaggttgtatccaccctgttactg
aatatcatcccagagaattgcatcccactgaacctgatgggaaaggccaagatccctagt
aaggcctgggtgaaggagcatcctcgatttgtgccaggatacaaatcagactccatgtgt
gactcccaggtggtcattcgttatggggagttgctggtaggcgttctggacaaggcccac
tatggaagttcagcttatggcctggtacactgttgttatgagctctatggaggagagacc
agtggcaagctgctcagctgccttgctcgtctcttcactgcttatcttcagttataccgt
ggcttcactatgtctgtagaagacattttagtgaatcatggggccaacaaacaaaggaag
atgattataaaaggatcagtcaaatgtggagcaaaggctctccgagctgcctttaacctg
ccagaaagcaccaatgagagtgaatgcagagacctctggcagaatgcccatctgaatgta
gaccagcgtcacttcgatatggtggagctcaaattcaaagaagaggttaatcaagtcagc
aacaatatcaataaggtgtgcatgccactgggtctacatcgttcatttcctgagaatagt
cttcagctgatggtgcagtctggagccaaaggttccacagtcaataccatgcagatctcc
tgtctgttgggccagattgagttggagggccgtcggcctcccatgatgccttctgggaaa
tcgcttccttgctttcagccttatgacccagagcctcattctgggggctttgtgtctggc
aggtttctcactgggattaaacctccggagttctttttccattgtatggctggtcgtgaa
ggtcttgtggacactgctgttaaaacaagccgttctgggtatctgcagagatgtgtgatt
aagcatctggagggccttgtagtccactatgatttgacagtgagggacagtgatggcagt
gtggtgcagttcctctacggggaggatggcctggacatccctaaaactcagttcctgcag
ctacgccagttgccattcatcaaaaacaactctgaggctatcagaaaatcacagtgcttg
gaaaaagtgctggtgaaactggaccacctggtggctgaaaaccactttaggaacattaaa
aagtggaaggccaagcatgcacatgtatccccaagagatggtggctttctgcgtttttct
aaaaagaacctgaacaagatgaaagctcgaggtgaagcccatacagaagacttgatcaat
gggagagatgcagctactctacatctacaggacaaatggagaactatgcatgattcctgc
cgtgcaaagtatatgaagaagacatcccgctgcccagatccctgtatagctgtttttcgg
cctgacatctgttttggttcggtgtctgagacatttgattctctcattgactcctaccta
actcagttcaacatcaaacaggagtttctcactttgcctgagacactcaactgtgaaaaa
ttaagacatctcttgcagctgaaatggcagagagcattgtgtgaaccaggcgaggcagtg
ggtctgcttgctgctcagagtattggggaaccctccacccaaatgacattgaacaccttc
cactttgctggcagaggagagatgaatgtcacactgggtattcccaggttacgtgaaatc
ctcatgattgccagttccaacatcaaaacacccatgatgagcatccctgttttatccaac
aagaaagccatgaagcaagtgaaaaccctgcggaagcaactcacacgtgtttgtctggca
gaggtgttacataaggttgatgtggtagagacgcttcgcatgaagggtaaaagaagccaa
aagaaacgggtcttcagaatcacattccagttccttcccccagagcgctatcagcaggaa
aagcttctgtcaccgcagcaaattctaagatttgtggaagacaaattctttcgtttactg
cttgaagccattaagaagctaagtgctaaactggcgtctataaacacagtggacacacgc
aaagccacaaccaaggacactgatccggacacagaggactcttcagccagagcggttgat
gatagagacacagaggaggaccgagtggtggatgatgaggcaaatgaaggggatgcagat
gcctctgatgccaagaggagagaaaagcaagaagaagaggttgactatgacagtgaagag
ggtgaggatagtggggatgaagagcaggaggaggcagcagaggagcttgaggagcaggta
ggatctgaagggccatctgaagagaagctgtgcagagccccactgtctgagccatccagc
ttcagtaaccaggagtatgaggctaacgctacacaggaatcaggaagggtcaacagagtg
ctacagctcagctccagcattgaacactacaaatatgaccacaaaaatggcctatcatgt
gagattaccctggttcttccagttagcaaagtgcactttgacctcacgtcactggtggtg
gcacaggcccagaatgcagtgctcatggaaactaagggtatcacacgctgcttactcaat
gagatgtccaacaagcatggtgtcaatgagctagtgctaaatacagagggcatcaacatg
caagagctattcagacatggaaatattctagacctaaatcgattgtattcgaatgaaatc
catgccatggccaacacatatggcattgaagtggccttgagggtcattgaaaaagagatt
aaagatgtgtttgctgtctatggtatcgaggtagacccaaggcacctctctctagtggct
gactacatgtgctttgagggggtgtacaaacctctcaatcggtatggcattcagtcaaac
agttctccgttgcaacagatgtcctttgagaccagctataagtttttgaaacaagctgcc
acattgggtatgaatacttaa
DBGET
integrated database retrieval system
