Electrophorus electricus (electric eel): 113587939
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Entry
113587939 CDS
T05787
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03020
RNA polymerase
eee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113587939 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
113587939 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113587939 (polr2b)
03400 DNA repair and recombination proteins [BR:
eee03400
]
113587939 (polr2b)
Enzymes [BR:
eee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113587939 (polr2b)
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113587939 (polr2b)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113587939 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
113587939
NCBI-ProteinID:
XP_026882706
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSSIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEENFEKPRREECQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTINQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRLPYACKLLFQELMSMSIAPRMMTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaggatgaagacatccagtacgatgaagacgatgatgagattacacctgac
ctttggcaggaagcctgttggattgtaatcagctcctacttcgatgagaaaggcctggta
cgacagcagctggactcatttgatgaattcattcagatgtccgttcagaggattgtggag
gatgctccacccatagatctgcaggctgaggctcagcacacctccggtgaggtggaggaa
ccgccacggtacttgctgaagtttgagcagatctacctgtccaagcccacccactgggaa
agagatggagctccctctcccatgatgcccaacgaggctcgactacgcaacctcacctac
tcggctcctttgtatgtggacattaccaagaccatcataaaggagggagaggagcagctt
cagacacagcaccagaaaaccttcatcggcaagatacccatcatgctccgctccacctac
tgtttgctcagcgggctgacggaccgtgatctgtgtgagctgaatgagtgtccgctggac
ccaggcggctactttatcatcaatggctccgagaaggttctcattgctcaggagaaaatg
gccaccaatacagtctatgtgtttgctaagaaagactcaaaatatgcgtacacggcagag
tgcaggtcctgcctggagaattcatccagacccaccagctcaatctgggtcagcatgatg
gccagagggggacagggagtaaagaagagtgctattggtcagaggattgtctccacccta
ccatacatcagacaggaagtgcccatcatcattgtgttccgagccctgggctttgtgtcc
gacagggacatcctggagcacatcatctatgattttgacgacccagagatgatggagatg
gtgaagccgtctctagacgaggcctttgtaatccaagagcagaacgtggctctgaacttc
attggctccagaggagccaagcccggcgtcaccaaggagaggaggatcaagtatgccaag
gaggtgctgcagaaagaggtcctgccccacgtgggcgtctccgacttctgcgagaccaag
aaagcctactttttaggttatatggtgcacagactcctgcttgcggcccttggccgaagg
gagctggacgacagagatcactacggcaacaaaaggctggacctggcgggacctctcttg
gcattcctcttccgaggaatgttcaagaacctgctgaaggagatccggatctatgcgcag
aagttcatcgaccgtggcaaggacttcaacctggagctggccatcaagacccgcatcatc
tcggacggcctcaagtactcgctggccacgggcaactggggcgatgtcaagaaggcccac
caggcccgagccggagtgtcgcaggtgctgaacaggctgacgttcgcctccacactgtcg
cacctgcgccgcgtcaactcgcccatcggccgagacggcaagctggccaagccccggcag
ctgcacaacacgctgtgggggatggtgtgcccagcagagacacccgagggccacgccgta
ggcctggtgaagaacctggcactgatggcgtacatctctgtgggctcccagccatccccc
atcctggagttcttggaggagtggagcatggagaacctggaggagatctcacctgcagcc
attgcagatgcgactaagatctttgtgaacggctgctgggtgggtattcacaaggacccc
gagcagctgatgaacacactcaggaagctcagaagacagatggacatcatcgtgtctgag
gtatctatgatccgggacatccgggagcgagagatccggatttacacagatgctggcagg
atctgccggccactgctcatcgtggagaaacagaagctactgctgaagagacgccacatc
gaccagctgaaagagagagagtacaacaactacagttggcaggacttggtggcaagtgga
gtggtggaatatatcgacacattggaggaggagacagttatgctggccatgacccctgat
gacctccaggagaagggcgtggcctactgctccacctacactcactgcgagatccacccg
tccatgatcctgggagtttgtgcatccatcataccctttcccgatcacaaccagtccccc
aggaacacctaccagtccgccatgggcaagcaggccatgggcgtctacatcaccaacttc
cacgttcgcatggacaccctggcccacgtgctctactacccacaaaagcctctggtcacc
acacgctccatggagtacctgcgcttccgagagcttccagcaggtatcaactccatcgtg
gccattgcatcgtacacgggctacaaccaggaggactcggtgatcatgaaccgctcggct
gtcgaccggggcttctttaggtctgtgttctaccggtcctacaaggaacaggagtcaaaa
aagggctttgaccaggaggagaactttgagaagcccagacgtgaggagtgccaaggcatg
cggcatgctatctacgacaagctggatgacgatgggctgatcgcgccgggcgtgcgcgtg
tccggcgaggacgtcatcatcgggaagacggtcaccctgcctgagaacgacgatgagctg
gacagcaccaaccgccgctacaccaagagagactgcagcaccttcctccgcaccagcgag
accggcatcgtggaccaagtcatggtcaccataaaccaggagggctacaagttctgcaag
atccgggtgcgctctgtccggatccctcagatcggagacaagttcgccagtcgtcacgga
cagaagggaacgtgtggaattcagtacaggcaggaggacatgccattcacgtgtgagggc
atcaccccggacatcatcatcaaccctcatgccatcccctccagaatgacagtcggccac
ttgatcgagtgcctacaggggaaggtgtctgccaacaaaggggagatcggagatgccaca
ccgttcaacgatgccgtgaacgtgcagaaggtctccaacctgctctccgagtatggctac
catctgagggggaacgaggtgttgtacaacggatttacgggacgcaagctcacctcgcag
attttcatcggacccacttactaccagcggctcaagcacatggtggatgataagatccac
tctcgggcgcgcgggcctgtgcagatcctcaacagacagcccatggagggccgatcacgc
gacggcggcctgcgttttggagagatggagcgtgactgccagattgctcacggcgcagct
cagttcctgcgcgagcgtctgttcgaggcctccgacccctaccaggtgcacgtatgcaac
ctgtgcggcctgatggccatcgccaacacacgcacgcacacctatgagtgcaggggctgc
cgcaacaagacccagatctcgctggtccgactgccgtacgcctgcaagcttctgtttcaa
gagttaatgtctatgagcatcgccccccgcatgatgaccacatga
DBGET
integrated database retrieval system
