Empedobacter falsenii: FH779_09935
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Entry
FH779_09935 CDS
T06702
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
efal
Empedobacter falsenii
Brite
KEGG Orthology (KO) [BR:
efal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efal03009
]
FH779_09935 (rimO)
Enzymes [BR:
efal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FH779_09935 (rimO)
Ribosome biogenesis [BR:
efal03009
]
Prokaryotic type
ribosomal protein modification factors
FH779_09935 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QLL58385
UniProt:
A0A7H9DTL4
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All DBs
Position
complement(2137662..2138966)
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AA seq
434 aa
AA seq
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MRTKSTGKKKINVITLGCSKNVYDSEVLMGQLKANGKEVVHEQSGEIVVINTCGFIDNAK
EESVDTILDYVQRKEDGLVEKVFVTGCLSERYKPDLIEQIPNVDQYFGTRELPLLLKALG
ADYKHELVGERLTTTPRHYAYLKIAEGCDRPCSFCAIPLMRGGNVSRPIEDLVTEATKLA
KNGTKELILIAQDLTYYGLDIYKKRELATLLKELVKIEGIEWIRLHYAFPAGFPQDVLDV
IREEPKVCNYIDIPLQHISTKLLKSMRRGTTHEKTNALLDAMRTKVPDMAIRTTLICGYP
GETEEDFQEMKAWVQEQKFDRLGCFTYSHEENTHAYNLEDDVPEEVKQQRVEEIMEIQSQ
ISYDLNQEKIGKQFRVMIDRKEGENFIGRTEYDSPDVDNEVLISAIDTYLPVGDFVNVEI
IEAYEFDLIGKVID
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcgactggaaaaaagaaaattaatgtaattacgttaggatgttctaaa
aatgtatacgattctgaggtgttaatgggacagctgaaagccaatgggaaagaggttgta
catgagcaatctggggaaattgtggtgattaatacttgtggtttcattgataatgcaaaa
gaggaaagtgttgatacaattttagattacgtgcaacgtaaggaagatggtttggtggaa
aaagttttcgtgacaggatgtttgtcagagcgatacaaaccagatttaattgagcaaatt
ccaaatgttgaccaatattttggtacgcgtgagttaccattattgttaaaagctttagga
gcagattacaagcatgaattagttggagaacgtttaacaacaacccctcgtcattatgct
tatcttaaaattgcagaaggttgtgatcgtccttgttctttttgtgcaattcctttgatg
cgtggaggaaatgtttctcgtccaatcgaagatctagttacagaagctactaaattagca
aaaaatggaacgaaagaattgattttgattgcgcaagatttaacgtattatggattagat
atttataaaaaacgtgaattagcgactttattaaaagaattagtgaaaattgaaggaatc
gaatggattcgtttgcattacgcatttccagcaggtttcccacaagatgttttggatgta
attcgtgaagaacctaaagtttgtaattatatcgatattccgttacaacatatttcaacg
aaattattaaaatcaatgcgtcgtggaacaacacacgaaaaaacgaatgcattattagat
gcgatgcgtacaaaagttcctgatatggcaattcgtacaacattgatttgtggttatcct
ggtgaaacagaagaagatttccaagaaatgaaagcgtgggtacaagagcaaaaatttgat
cgtttgggatgttttacttattctcacgaagaaaatacgcatgcctataatttagaagat
gatgttcctgaagaagtgaaacaacaacgtgttgaagaaattatggaaattcaatctcag
atttcgtacgatttgaatcaagaaaaaattggaaaacaattcagagtaatgattgatcgc
aaagaaggtgagaattttattggacgtacagaatatgattcgccagacgttgataacgaa
gttttgatttcagcaattgatacctatttaccagttggtgattttgtaaatgtagaaatt
atcgaagcttacgaattcgatttaattggaaaagtaattgattaa
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