Enterococcus faecalis D32: EFD32_2000
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Entry
EFD32_2000 CDS
T02172
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
efd
Enterococcus faecalis D32
Pathway
efd03030
DNA replication
efd03430
Mismatch repair
efd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFD32_2000
03430 Mismatch repair
EFD32_2000
03440 Homologous recombination
EFD32_2000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efd03032
]
EFD32_2000
03400 DNA repair and recombination proteins [BR:
efd03400
]
EFD32_2000
Enzymes [BR:
efd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFD32_2000
DNA replication proteins [BR:
efd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFD32_2000
DNA repair and recombination proteins [BR:
efd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFD32_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
DNA_pol3_a_NII
PHP
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
T2SSK
Rv2179c-like
HHH_3
DNA_pol_A_exo1
DUF6120
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFO44882
LinkDB
All DBs
Position
complement(2064729..2069084)
Genome browser
AA seq
1451 aa
AA seq
DB search
MTEKARDLFDKLMTQIQLDDTAKEHPLIQNGRIDKVIVHQQSRLWEFHLSFDELMPVMLY
QTFMQQLELAFQQIAQVSVQITTNQTTFTEEQLTDYWQLALLNSQCNTPLVQKVLKTQTP
QFEDRKIILPVDNEAVIPYLKQQYLPIIEELYFSYGFPKFHIEPKMDQQQAAEVLKKFEE
QKLEQAAAFQQQAAESLVKHEQMKKEKQQQAPAFDGPIRLGRNIPNDEPIMPMGNILEEE
RRITIEGFIFDKEVRELRSKRKILILKITDYTSSFVVKKFSNGEKDEQVFDAIQPQSWIR
VRGSVQEDTFMRDLVMNAQDLMEVAHAPRKDYAPEGEKRVELHMHSNMSTMDATNKVGDL
VAQAGKWGHKAIAITDHGGAQAFPDAHAAGKKAGVKILYGVEANIVDDGVPIAYNEEHIE
LTDATYVVFDVETTGLSAVYDTIIELAAVKMHKGNVIETFEQFIDPGHPLSQTTINLTGI
TDEMVRGSKSEEEVLRMFKEFSEGTILVAHNASFDMGFLNTSYGKHGIPEAANPVIDTLE
LSRFLYPHFKSHRLNTLSKKFGVNLEQHHRAIYDSESTGHLCWIFLKEAKENHDMHFHDD
LNRHIGEGDSYKRARPFHATILATTQAGLKNLFKLISMSNVDYFFRVPRIPRSQLSKLRE
GLLIGSACSNGEIFEAMMQKGVEEAKNRAKFYDYIEVMPKPVYAPLIEQELVKNEADLEE
IISNLVKIGDELGKLVVATGNVHYLNEEDAIYRKILVGSMGGANPLNRHSLPKVHFRTTD
EMLTEFQFLGQDVAKRIVVENPNKVADLCEEVIPVKDDLYTPKIPGSEQEITDLSYNRAR
ELYGDPLPEIVEKRLEKELNSINGNGFSVIYLISQKLVHKSNEDGYLVGSRGSVGSSFVA
TMTGITEVNPLAPHYYCPECQYSEFYEDGSYGSGFDMPEKACPKCGARLFKDGHDIPFET
FLGFHGDKVPDIDLNFSGDYQAEAHNYTKVLFGEEYVYRAGTIGTVADKTAYGFVKGYER
DHNLHLRGAEIDRLAKGSTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQYPADDQEAEWKT
THFDFHSIHDNILKLDILGHDDPTVIRMLQDLSGIEPKTIPTDDPEVMRIFEGPDVLGVD
AEQIYSKTGTLGIPEFGTRFVRGMLEQTHPSTFAELLQISGLSHGTDVWLGNAEELIRRG
EANLAEVIGCRDDIMVYLIHAGLDSGMAFKIMETVRKGQWNKIPDELRDTYLNAMKENNV
PDWYIDSCSKIKYMFPKAHAAAYVLMALRVAYFKVYFPILYYCAFFSVRADDFDLVAMSQ
GKEAVKARMKEITDKGMDASTKEKNLLTVLELCNEMLERGYKFGMIDLYKSDAENFVIEG
DTLIAPFRAVPSLGLNVAKAIVAAREEQPFLSKEDLATRGKVSKTLIEYMNENGVLKDLP
DENQLSLFDML
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaaaaagcacgcgatttatttgataaactgatgacgcaaattcagttagatgac
acagcgaaagaacatcccttaattcaaaatggccggattgacaaggtcattgttcaccaa
caaagtcgcttatgggaatttcatttaagttttgatgaattgatgccagtgatgctatat
caaacatttatgcaacaattggaactagcttttcaacaaattgcgcaggtttccgttcaa
ataaccacaaatcagacaacatttactgaggaacaattaacggattattggcagttggcc
ttgttaaatagtcaatgcaatacgccgttagttcagaaagtcttaaaaacacagacacca
caatttgaagatcggaaaattatcttacctgttgataatgaagcagttattccttatttg
aagcaacaatatttaccaattattgaggaactttatttctcttacgggtttcctaaattt
catattgaaccaaaaatggatcaacagcaagctgcagaagtgctgaaaaagtttgaagag
caaaaattagaacaagccgcagcctttcaacaacaagctgctgaatcgcttgttaaacat
gaacaaatgaaaaaagaaaaacaacaacaagcgcctgcgtttgatggtccaattcgttta
ggtcggaatattcccaatgatgaacccattatgccaatgggaaatatactggaagaagaa
cgtcggataacgattgaaggctttatttttgataaagaagtgcgtgaattgcgttctaaa
cgaaaaattttaattttgaaaataactgattatacttcctctttcgtggtgaagaaattt
tcgaatggggaaaaagatgaacaagtttttgatgcgattcaaccgcaaagttggattcgt
gttcgtggtagtgtacaagaagataccttcatgcgtgatttagtcatgaatgctcaagat
ttgatggaagtcgcccatgcgccaagaaaagactacgcgccagaaggtgaaaaacgtgta
gaattacacatgcatagtaacatgagtacaatggatgcgaccaataaagtcggtgacttg
gtggcgcaagcggggaaatgggggcacaaggccatcgcaattacggatcatggcggcgcc
caagcgtttcctgatgcccatgctgcaggtaaaaaagcaggcgttaaaattttatacggc
gtggaagccaatattgttgatgatggtgtacctattgcttacaacgaagaacatattgaa
ttaacagatgctacctatgtggtctttgacgtggaaacaacggggctttccgctgtttat
gatacaattattgaattggccgcagtcaaaatgcacaaaggaaatgtcattgagactttt
gagcagtttattgatcctggccatccattatctcaaacgacaattaatttaactgggatt
acagatgaaatggtgcgcggttcaaaatccgaagaagaagttttacgcatgtttaaagag
ttttcagaaggaactattttagtggcccacaacgcttcttttgatatggggttcttaaat
acaagttatggcaaacatggaatacctgaagcggctaatcccgtcatcgatacattagaa
ttatccagattcttgtatccacatttcaaaagccatcgtctaaataccttatcgaaaaaa
tttggcgtcaacttagaacaacatcaccgcgccatctatgactcggaatcaacaggtcat
ttgtgctggattttcttaaaagaagcgaaagagaatcatgatatgcatttccatgatgat
ttgaatcgtcatattggcgaaggagattcatacaaacgagctcgacctttccatgcaacg
attttagcaacaactcaagcaggattaaaaaatctttttaaattgatttcgatgtccaat
gtagattattttttccgagtaccacggattcctcgttcgcaattatcgaagttaagagaa
ggacttttaatcggttccgcatgttcaaacggcgaaatttttgaagcaatgatgcaaaaa
ggtgtcgaagaagcaaaaaatcgtgccaaattctacgattatattgaagttatgcccaaa
ccagtttacgcgccattaattgaacaagaattggtgaaaaatgaagcagatttggaagaa
attattagtaatctggtgaaaatcggtgacgaacttggtaagctggttgtcgccactgga
aatgttcattatttaaatgaagaagatgccatctatcggaaaattttagtcgggtctatg
ggtggcgctaatccgttaaatcgccatagtttaccaaaggttcatttcagaaccaccgat
gaaatgttaacggaatttcaatttttaggacaagacgtcgctaagcgaattgtagtagaa
aatcccaacaaagtcgctgatttatgtgaagaagttattccagtaaaagacgatttgtat
acgccaaaaattcctgggtctgaacaagagatcactgatttaagctacaatcgtgcgcgc
gaattgtatggcgatcctttaccagaaattgtcgaaaaacggttagaaaaggaactgaat
tcgattaacgggaatggtttctcggtcatttatttaatttctcaaaaactggtgcataaa
agtaatgaagatggctatttagttggttcacggggctctgtcggttcgagttttgttgcg
acaatgacagggattactgaagtaaatcctttagcgccacattattattgtcctgagtgt
caatattctgagttctatgaagatggttcctatggttcagggtttgatatgcctgaaaaa
gcctgtccaaaatgtggcgctcgattgtttaaagatggtcacgatattccttttgaaacg
ttcttaggattccatggcgacaaagttcctgatatcgatttgaacttttctggcgattat
caagccgaagcccataactacacgaaagttctttttggtgaagaatatgtctaccgggca
ggaaccattggtacagtagccgacaaaacagcgtatggctttgttaaaggatatgaaaga
gatcataatttacatttgcgtggtgctgaaattgatcgcttagccaaaggttcaacaggg
gttaaacggacgactgggcagcatcccggcggtattattgtaattcctgattacatggat
gtttatgactttacgccaattcaataccctgctgatgatcaagaggcagaatggaaaacg
acgcactttgatttccattccattcacgataatattttaaaacttgatattctaggacat
gatgatccgaccgtgattcggatgttacaagatttatctgggattgagccaaaaaccatc
ccaacagacgatccagaagtgatgcgtatttttgaaggacctgatgttctaggtgtggat
gcagagcaaatttattctaaaacaggaactttaggaattcctgaatttgggacacgtttc
gttcgaggtatgttagaacagacgcatccatcaacttttgcagaattacttcaaatttct
ggactgtctcacggaaccgatgtgtggctagggaatgcagaagaattgattcgccgtggc
gaagccaatcttgctgaagtaattggttgtcgggatgatatcatggtttatttaattcat
gctggtttggacagtgggatggcctttaagattatggaaacggtacgtaaaggacaatgg
aataagattcctgatgaactacgggatacgtatttaaatgcgatgaaagaaaacaacgtc
cctgactggtatattgattcttgttctaaaattaaatatatgttcccgaaagcccatgcg
gcagcatatgtattaatggcgttgcgggtcgcttactttaaagtttatttcccaatctta
tattactgtgcatttttctccgttcgggcggatgacttcgacttagtggcaatgtcacaa
gggaaagaagctgtgaaagcacgaatgaaagaaattacggacaaagggatggacgcctcc
actaaagagaaaaacttattaacggttttagaattatgtaatgaaatgctggaacggggc
tataaatttggcatgattgatttgtacaaatcagatgctgaaaattttgtgattgaaggg
gataccttgattgcacctttccgagcagtgccaagtttaggcctcaacgtagcgaaagcc
attgtcgctgcgcgagaagagcaaccgttcttgtcgaaagaagatttggcaacacgaggc
aaagtttctaaaacgttgattgaatacatgaatgaaaatggtgtcttaaaagacttgcca
gatgaaaaccaattatcattatttgatatgttataa
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integrated database retrieval system
