Escherichia fergusonii: EFER_2908
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Entry
EFER_2908 CDS
T00811
Symbol
speC
Name
(GenBank) ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
efe
Escherichia fergusonii
Pathway
efe00330
Arginine and proline metabolism
efe00480
Glutathione metabolism
efe01100
Metabolic pathways
efe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
EFER_2908 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
EFER_2908 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
EFER_2908 (speC)
Enzymes [BR:
efe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
EFER_2908 (speC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAQ90401
UniProt:
B7LPT6
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All DBs
Position
complement(2971457..2973598)
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AA seq
713 aa
AA seq
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MSMKTMKIAASGELVARLSTHRDVVALDSTDFTEVAAVVITVTDSRSGILTLLKRTGFQL
PVFLFSEQACSMPQGVTAVMNGSEQQWLELEAAARRYEENMLPPFYDTLTQYVAMRNSTF
ACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVRLGDLLIHEGSAKDAQKFAAKV
FHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPIYLEAAR
NPFGFIGGIDAHCFNEEYLRQQIRAVAPEKADQPRPFRLAIIQLGTYDGTIYNARQVIDT
IGHLCDYILFDSAWVGYEQFIPMLANSSPLLLELDEKDPGIFVTQSVHKQQAGFSQTSQI
HKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWADCVT
LGIETRKAILERCHLLHPFVPPVVDGKLWQAWSTEVIASERRFFSFEPGATWHGFEGYAE
DQYVIDPCKLLLTTPGIDAASGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPA
ESAEKMAHLVAMLVQFEQHIEDDTPLADVLPSVFNKYPVRYRDYTLRQLCQEMHDLYVSF
DVKDLQKAMFRQLSFPKVMMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLC
VVPGEEWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDTDGMKRLYGYVLK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatgaaaacaatgaaaattgccgccagtggtgaactggttgcccgtttgtctacg
catcgtgatgtggtggcgctggatagtaccgattttaccgaagtcgccgctgtcgtcatc
acggttacggatagtcgcagtgggatccttaccttactcaaacgcactggttttcaatta
cccgtatttctctttagcgagcaggcttgctcgatgccgcagggggtgacagcggttatg
aacggtagcgaacaacaatggctggagttggaagctgctgcccgtcgctatgaagaaaat
atgctaccgccgttttatgacaccttgactcagtatgtcgcaatgaggaatagcactttt
gcctgccctgggcatcagcatggcgcattctttaaaaagcatcctgctggtcgtcatttt
tatgatttctttggcgagaatgtttttcgcgccgatatgtgtaatgccgatgtcaggttg
ggcgatttattgattcatgaaggctcagcaaaagatgctcaaaagtttgccgccaaagtt
tttcatgccgataaaacctactttgttctgaatggaacttcggcggcaaataaagtggtc
accaatgcattactgacacgtggcgatctggtgctttttgatcgcaataatcataaatca
aatcatcatggtgctctgattcaggctggcgcaacaccgatttatttagaagctgcgcgt
aatccgtttggctttattgggggtattgatgcgcactgttttaatgaagagtatctgcgc
cagcaaattcgtgccgttgcgccagaaaaggctgaccagccgcgcccattccgtctggca
attattcagttgggaacttacgacggcactatctacaacgctcgtcaggtgatcgacacc
atcggtcatctttgtgattacattttgtttgattctgcctgggtcggttatgagcagttt
atcccgatgctggcaaatagctcgccgttgttgttagagcttgacgaaaaagatcctggc
atttttgtcactcagtcggtacacaagcagcaagccggattctcgcaaacctcccagatc
cataaaaaagataaccatattcgcgggcaggcacgtttttgtccgcataaacggctgaat
aacgcatttatgttgcatgcttccaccagccctttttatccattgtttgccgcgctggat
gttaacgccaaaatccacgaaggggagagtgggcgtcggttgtgggctgattgcgtgact
ctggggatcgaaacccgtaaggcgattctggaacgttgtcatctgctgcacccgtttgtg
ccgccggttgtggatggtaagctgtggcaagcgtggtcgacagaagttatcgccagcgag
agacggttttttagttttgaacctggagcaacctggcatggatttgaaggttatgcggag
gaccaatatgttatcgacccgtgtaaattgctgctgacaacaccaggaatcgatgctgcc
agtggtgagtatagcgattttggcgttcctgcgaccattctggcgcattacctgcgtgaa
aatggcatagtgcctgaaaagtgcgatctcaattccattttgttcctgctgacgcctgcc
gaaagtgccgagaagatggcacatttggtggcaatgctggtgcaatttgaacaacatatt
gaagatgacacaccactggctgatgtgctgccgtctgtcttcaacaagtatccggtacgt
tatcgtgactataccctgcgccagctctgtcaggagatgcacgatctgtatgtcagtttc
gacgtcaaagacctgcaaaaagcgatgttccgccagctgagtttcccgaaagtaatgatg
aacccacaggatgcgcatagcgcctatattcgcggtgaagtggagttggtgcggattcgt
gatgccgaagggcgaattgcggccgaaggggcgttaccttatccacctggcgtgctgtgc
gtggtgcctggagaagagtggggcggggcggtacagcgttattttctggcgctggaagaa
ggggtgaatttgctaccaggattttcgccggagttacaaggtgtctatagcgaaacagat
acggacgggatgaaacgtttgtatggttatgttttgaagtga
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