Escherichia fergusonii: EFER_3060
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Entry
EFER_3060 CDS
T00811
Name
(GenBank) Putative aldolase or racemase
KO
K01753
D-serine dehydratase [EC:
4.3.1.18
]
Organism
efe
Escherichia fergusonii
Pathway
efe00260
Glycine, serine and threonine metabolism
efe00470
D-Amino acid metabolism
efe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EFER_3060
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EFER_3060
Enzymes [BR:
efe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.18 D-serine ammonia-lyase
EFER_3060
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Gene cluster
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Motif
Pfam:
D-ser_dehydrat
Ala_racemase_N
Histidinol_dh
CAP12-PCTIR_TIR
Motif
Other DBs
NCBI-ProteinID:
CAQ90553
UniProt:
B7LQJ3
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Position
3135025..3136254
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AA seq
409 aa
AA seq
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MNVMKYHSEPLVPHKSALMQMPANLLAEDVCLPAAIIKKQALENNITWMQRYADARGVSL
APHGKTTMTPWIFQAQQAAGAWAIGVGSAWQADAAMASGIQRVLMVNQLVGKANMQLIAQ
LQQHYPTVDFICCIDSIENARALSAFFASQQQTLNVMIELGVPGGRCGCRSTDAALALAK
QAAQLPGLRLRGLELYEGVLHGDDPQPQVEALLRDAAQLACDMASLVDGEFILTGAGTVW
YDVVCNIWLAAEKPDNCRIVIRPGCYITHDTGIYDAAQQQLLARDPVACDLAGDLTSALE
LVAMVQSVPEADRAVVNFGKRDCAFDAGLPQPVAHYRNGKSLAFDPQAIRSTGIMDQHCM
LQLSANSDVQVGDILVFGTSHPCLTFDKWKALLLTDDDYNVLAELDTLF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgttatgaaataccactctgaacctctggttccccataaatctgccctgatgcaa
atgcccgcaaatctccttgccgaagatgtctgtttacctgccgcaatcattaaaaagcag
gccctggagaacaacattacgtggatgcagcgttatgctgacgcgcgcggcgtttcgctg
gcaccgcacggtaaaaccaccatgacgccgtggatttttcaggcgcagcaggcggcaggc
gcctgggcaataggtgtcggtagcgcatggcaggctgatgcggcaatggcgagcggtatt
cagcgagtgctgatggttaaccaactggtcggcaaggcgaatatgcagttgattgcccag
ttgcaacaacattacccgacggtcgattttatctgctgtatcgacagcattgagaacgcc
cgcgctttgtctgccttttttgccagtcagcaacagacactgaacgtgatgattgagctg
ggtgttcccggcgggcgctgtggttgccgctcaacggatgccgcactggcactggctaaa
caggcggcccaattaccggggttacgcctgcgggggcttgagttatatgaaggcgtttta
cacggtgacgatccacaaccgcaggtagaagctctgctgcgggatgccgcacaactggcc
tgtgatatggcaagtctggttgatggcgagtttattctcaccggagcaggcacggtctgg
tatgacgtggtgtgcaatatctggctggcggcagaaaagcctgataactgccgcattgtt
attcgcccaggctgctacatcactcacgacaccgggatctacgacgcggcacaacaacag
ttgcttgcccgcgatcctgtggcctgcgatctggcaggcgatctcacatctgcgctggaa
ctggtcgccatggtgcaatcggtgccggaagctgatcgtgcggtggtaaattttggtaag
cgtgattgcgccttcgacgccggactgccgcaaccagtcgcccactaccgcaacggcaaa
tcactggcatttgatccacaggcgattcgcagtacaggtattatggatcagcactgcatg
ttgcaactgtcagctaatagcgacgtgcaagtgggggatattctggtgtttggcacatcg
catccgtgcctgaccttcgacaaatggaaagcgttgttattgactgatgacgactacaac
gtactggcagagctggatacattgttttga
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