Escherichia fergusonii: EFER_3908
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Entry
EFER_3908 CDS
T00811
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
efe
Escherichia fergusonii
Pathway
efe00540
Lipopolysaccharide biosynthesis
efe01100
Metabolic pathways
efe01250
Biosynthesis of nucleotide sugars
Module
efe_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EFER_3908 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
efe01005
]
EFER_3908 (waaD)
Enzymes [BR:
efe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EFER_3908 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
efe01005
]
Core region
EFER_3908 (waaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAQ91342
UniProt:
B7LVH8
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All DBs
Position
4009456..4010388
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaagccctgaat
gacaaaggcatcaccgatattctggtggtggacaacctgaaagatggcaccaagtttgtg
aacctggtggatctgaatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgcctggagcgagaaatcccgttcctgtacgcttcttccgcagccacttac
ggcggacgcacctccgactttattgaatcccgtgaatacgaaaaaccgctgaacgtctac
ggttattcgaagttcctgtttgatgaatatgttcgccaaatcctgccagaagcaaactca
cagattgttggcttccgctatttcaacgtttatgggccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagctcaacaacggtgaatcgccgaaactg
ttcgaaggtagcgagaactttaaacgcgacttcgtctacgtgggtgatgtggccgatgtg
aatctgtggttcctggaaaatggcgtatccggcatcttcaacctcggtaccggtcgtgca
gaatccttccaggcagtagcggatgctacgcttgcttatcacaagaaaggacagatcgaa
tacattccgttcccggataaacttaaaggtcgctatcaggcgttcacgcaggcagatctg
acgaatctgcgcgcggcgggttacgataaaccgttcaaaaccgttgccgaaggcgtaacg
gaatatatggcctggctgaatcgcgacgcataa
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