Effusibacillus dendaii: skT53_07360
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Entry
skT53_07360 CDS
T06872
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
eff
Effusibacillus dendaii
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eff03009
]
skT53_07360
Enzymes [BR:
eff01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
skT53_07360
Ribosome biogenesis [BR:
eff03009
]
Prokaryotic type
ribosomal protein modification factors
skT53_07360
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCJ85751
UniProt:
A0A7I8DCX2
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All DBs
Position
complement(719761..721092)
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AA seq
443 aa
AA seq
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MNQKLAVVTLGCEKNLVDSEVMMGLVAKNGYDVVQNPEEADIIIVNTCGFIDAAKAESVE
TILSMAQYKEEGSCKTLLVSGCMVQRYQDELITEIPEIDGLVGTGEYHRINELIDEVKQA
DSVPQYVGNPVYLYDELTPRLVTGGASAYLKIAEGCDHSCTFCAIPSMRGKFRSRPIESI
VAEAESLVKQGVKEVMLIAQDSTQYGLDLYGKRNLHKLLEALNEVDGLEWIRLHYAYPGF
FTDEVIDAFARLPKVAKYIDMPLQHSEDHILKAMRRPGHQAQIRRLIDKIRSRVPDVAIR
TSFIVGFPGETEADFDNLCRFVREIGFDHIGVFAYSPEEGTPSAEMENQVSEETKERRAS
LLMEIGRQVAAERNAARVGKQLKVLIERQDDQNPDVYIGRTQYDAKEIDGLVFVTGGGRL
EAGSMVDVRITHSYDFDLSGECV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaaactagcagttgttacattaggctgtgaaaaaaacttggtagactctgaa
gtgatgatgggcctcgtagccaaaaacggatacgatgtggtgcaaaatccggaagaagcg
gatatcatcattgtcaatacatgcggatttattgatgcggcaaaagcagaatcggttgaa
actattctttcgatggcgcaatataaagaagaggggtcctgcaagactttgctggtctcc
ggttgtatggtgcagcgttatcaggatgaactgattacggaaattccggagattgacggc
cttgtcggtacgggtgaatatcatcgaatcaatgaactgattgatgaggtgaagcaggca
gattcggttccgcagtatgtggggaatccggtttacctgtatgatgaactgacaccccgt
ttagtgaccgggggggcatccgcctacttgaaaatcgcggaaggatgcgaccactcctgt
acgttttgtgcgattccttccatgcgcggaaaattccgttcacgaccaatcgaatcgatt
gtagcggaagcagagtcgttggtaaagcagggcgtaaaagaggttatgctgattgcgcag
gactctacccaatacggattggatctttatggaaaacggaatttgcacaagttgttggaa
gcgttaaatgaagtggatggtttggagtggatccggcttcattatgcataccccggcttt
ttcacggatgaagtgatcgatgcatttgcccgtttgccaaaggtggctaaatatattgat
atgccattgcagcattcggaagatcatattttgaaggcgatgcgtcgaccgggtcatcag
gcgcaaatacgtcgtctgattgacaaaattcgtagccgggtgccggatgtagcgattcgg
acctcctttattgtcggatttccgggtgaaacagaagcggattttgataatctgtgtcgg
tttgttcgtgagattggattcgaccatattggcgtatttgcttattcgccggaggaaggc
actccgtctgctgaaatggagaatcaggtttcggaagaaacaaaggaacggcgggccagc
cttttgatggaaatcgggcgtcaagtcgctgccgagcgaaatgcagcgagggtaggcaaa
caattgaaagtgctgattgagcggcaggacgatcaaaatccggatgtttatatcggccgc
acacagtatgatgcgaaagaaattgacggattggtgtttgttacaggcggcggtcgatta
gaagcgggcagcatggtagacgtccgcattacgcattcgtatgattttgatctgtcaggg
gagtgtgtgtga
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