Epinephelus fuscoguttatus (brown-marbled grouper): 125890858
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Entry
125890858 CDS
T08419
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04020
Calcium signaling pathway
efo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125890858 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125890858 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125890858 (grin1b)
Ion channels [BR:
efo04040
]
Ligand-gated channels
Glutamate (ionotropic)
125890858 (grin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
125890858
NCBI-ProteinID:
XP_049435669
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Position
LG6:complement(46258115..46343391)
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AA seq
906 aa
AA seq
DB search
MELLRGVLLLTVLQCCSVARGGCEPRLVNIGAVLSQKRYEQVFKEAVSQANTLYGKEKFK
MNAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVV
GLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKR
LETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSPDTNLTALLLEAKDLEARVI
ILSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESA
HIADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIE
FNDDGDRRFATYSILNYQQKPGRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMST
KLKIVTIHQEPFVYVKPTKTDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGF
CIDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLT
INNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLY
LLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAG
FAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVE
LSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGF
GIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFM
LVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDP
SVSTVV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggagctccttcgtggcgtgctcctcctcaccgtgctgcagtgctgttctgtggcccgt
ggcggctgtgagcctcggctggtgaacatcggcgccgtgttgagtcagaagcgctacgag
caggtgttcaaggaggcggtgagccaggccaacacgctgtacgggaaggagaagttcaag
atgaacgccatctccgtcactcacaaacccaacgccatccagatggctctgtctgtctgc
gaggacctcatctccaaccaggtgtatgcgatcctggtcagtcaccctcctcagtccaac
gaccacctgactccaacacctgtctcctacaccgccggtttctaccggatccctgtggtc
ggcctgacaacacgcatgtccatctactctgacaagagcatccacctgtcgttcctgagg
acggtgcctccgtactcccaccaggctcaggtctggttcgacctgatgagagagttcagg
tggaatcacatcatcctcatcgtcagcgacgaccacgaaggccgagcggctcagaagaga
ctggagacgctgctggaggagagggagaccaagactaaaaacaggaactatgaaaacctc
gaccaacagaactttgacttcaggagaacacccaaggcggagaaggtgctgctgttcagt
ccagacaccaacctgacggctctgctgctggaggccaaagacctggaggcccgagtcatc
atcctctctgccagcgaggatgaagcggcggcggtgtataaggcggcacggcagctcaac
atgaccggctctggttacgtgtggctggtcggggagagagagatgacgggcaaagcgctg
agtgaagctccagacggcctgctgggcctccagctgattaacggtaagaacgagtcggct
cacatcgcggacgccgtggcggtggtggctcagtctctgcaggagctgtttgagaaggag
aacatcacagagccgccgcggggctgcgtgggaaacaccaacatctggaggaccggaccg
ctttttaaacgagtgctgatgtcgtccaagtaccctgacggtctgacaggacggatcgag
tttaacgacgacggcgaccgacgcttcgccacttacagcatcctaaactaccaacagaag
ccaggtcgcctcgtccaggtcggagtcttcaatggatcacaggttgtgatgaaccctcag
aggaagatcatctggcctggaggagagacagagaaaccagtcggataccagatgtcgact
aaattgaagattgtgacgatccatcaggagccgtttgtttacgtgaagccaacaaagact
gacgggacgtgtaaagaagagtacaccgtcaatggagtcttaatcaagaaggtgatctgt
actggacccaacgggaccataccaggtcagcccatcgtccctcagtgttgctatggtttc
tgcatcgacctgctcatcaagctggcgatgagcatgaacttcacctacgaggttcacctg
gtggctgatgggaaatttggcacgcaggagcgagtcaacaacagtaacaagaaggagtgg
aacgggatgatgggggagctgctgggaggtctggccgacatgatcgtcgctcccctcacc
atcaacaatgagcgcgctcagtacatcgagttctccaaacccttcaaataccagggactc
accatcctcgtcaagaaggaaatccctcgcagcactctggattcattcatgcagccgttc
cagagcacactgtggctgttagtcggtctgtcggtccacgtggtggcagtgatgctttac
ctattagaccggttcagcccgtttggaaggtttaaagtgaacagtgaagaagaagaagaa
gacgccctcaccctgtcctctgccatgtggttctcatggggagtactgttgaactctggg
ataggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcaggt
ttcgctatgatcatcgtagcatcgtatactgctaacctggcagccttccttgtgttggac
cggcctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataag
ttcatctacgccacagtgaagcagagttcggtggatatctacttcagacggcaggtggag
ctgagcaccatgtaccggcacatggagaaacacaactatgagagcgctgctgaggccatt
caggccgtcagagacaataaacttcatgcctttatctgggacagcgctgtgttggagttc
gaggcgtcacagaagtgtgatctagtgacgacaggagagctgttctttcgctccggattc
gggattggaatgaggaaagacagtccgtggaagcagaacgtttctttggccattctcagc
tctcatgagaatggcttcatggaggatctagacaagacatgggttcgataccaggagtgt
gactccaggagcaacgcccccgctaccctaaccttcgagaacatggcaggtgtgttcatg
ctggttgccgggggcatcgtcgccgggatcttcctcatctttatcgagatcgcttacaaa
cgtcacaaagacgctcggaggaaacagatgcagctggccttcgctgctgtgaacgtctgg
aggaagaacctgcagccgtacccgactgacatcaccggacagctcaacctatcagatccc
tccgtcagcacggtggtctga
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