Epinephelus fuscoguttatus (brown-marbled grouper): 125893636
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Entry
125893636 CDS
T08419
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
efo03016
]
125893636 (cdkal1)
Enzymes [BR:
efo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125893636 (cdkal1)
Transfer RNA biogenesis [BR:
efo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125893636 (cdkal1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
125893636
NCBI-ProteinID:
XP_049440365
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Position
LG8:27235865..27523331
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AA seq
565 aa
AA seq
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MPSACDSLIEDIEDMVSSSDPTPHERQSARKSIIPRSRKKKELLSHEELQADSVIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPADADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCELWLTSEDTGAYGRDIGTDLPTLLWKLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDIICG
FPGETDADFQETVDLVKHYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKVLSQLFH
SYNPYDHEVGERQNVLVTEESFDAQYYVAHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGRPVEDSQPFTPSIAAPLQKGEVSGLMQEQKANGIHGPASSSASSSVLLFGSYSLDR
EAVKKLGIGLTLVAAILAFIVEKLY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgaagatatcgaggacatggtgtcctctagtgac
cccactcctcacgagagacagtctgccagaaagagtatcataccaaggtccaggaagaaa
aaagagcttctgagccacgaggagctccaagctgacagtgtgatccctggcacccaaaaa
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctagctgccagcggatacaagatgacagatgacccagcagatgcagacctgtgggtg
ctcaacagctgcactgtgaaaaaccctgcggaggaccacttcagaaattcaatcaaaaaa
gcccaggagcagcagaaaaaggtggtggtagcaggttgtgtcccgcaggctcagccacgg
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtggtggacgaggccgttaaaggccactcagttcgtctgttgggtcagaagaaagatgga
ggccggaggctcggaggagccagactggacctgcccaagatcaggaagaaccctctcatt
gaaatcatctccattaacactgggtgtctgaatgcatgtacctactgtaagactaagcat
gccagaggagacctggccagctatcccatcgaggagcttgtggagagagccaggcaatct
ttccaggagggagtgtgtgagctctggttgaccagtgaagacacaggagcatacggtaga
gacatagggacagacctgcccacactactgtggaaattggtggaagaaattcctgaagga
gccatgctgaggctgggaatgaccaacccaccatatatcctggaacacctagaggagatg
gctaagatattgaatcatccacgagtctatgccttcctccatgtccctgtgcagtcggcc
tcagacagcgtcctgatggacatgaagagagagtattgcatcgatgacttcaaaaaagtg
gtggacttcctcaaagagagggtcccaggcgtaaccattgccacagatataatctgcggt
tttcctggtgagacggatgcagacttccaagagacagtagacttggtgaagcactaccga
ttccccagtcttttcatcaaccagttctaccccagaccgggtacacctgccgccaagatg
gagcaagtacctgcacatgtgaagaagcagaggactaaagttctgtcacaactcttccac
tcctacaacccctacgaccacgaggtcggggagaggcagaatgtgttggtgacagaggag
tcatttgatgcccaatactatgtggcccataacaagttctatgaacaggtgctggtgcct
aagagggctgagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcctgaaaggccggccggtggaagacagtcagcccttcactccctccattgctgcacca
cttcagaaaggagaggtgtctggcctgatgcaggaacagaaggccaatggcatccatggt
cctgcttcctcttcggcgtcttcatctgttttgttgttcggctcgtacagtctggacagg
gaagcagtgaagaagctgggaatcgggctcaccttggtggcagccatcttggccttcatt
gtagagaaactgtactga
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