Epinephelus fuscoguttatus (brown-marbled grouper): 125894799
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Entry
125894799 CDS
T08419
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04210
Apoptosis
efo04218
Cellular senescence
efo04620
Toll-like receptor signaling pathway
efo04621
NOD-like receptor signaling pathway
efo04622
RIG-I-like receptor signaling pathway
efo04623
Cytosolic DNA-sensing pathway
efo04625
C-type lectin receptor signaling pathway
efo04920
Adipocytokine signaling pathway
efo05132
Salmonella infection
efo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125894799 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125894799 (nfkb1)
04218 Cellular senescence
125894799 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125894799 (nfkb1)
04621 NOD-like receptor signaling pathway
125894799 (nfkb1)
04622 RIG-I-like receptor signaling pathway
125894799 (nfkb1)
04623 Cytosolic DNA-sensing pathway
125894799 (nfkb1)
04625 C-type lectin receptor signaling pathway
125894799 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125894799 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125894799 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
125894799 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125894799 (nfkb1)
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125894799 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Death
Motif
Other DBs
NCBI-GeneID:
125894799
NCBI-ProteinID:
XP_049442381
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All DBs
Position
LG9:4295096..4336542
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AA seq
937 aa
AA seq
DB search
MAGDDHYLHTSNQILDNIMMDPSWEFTPFPVMHQTPSVRTVDGPFLQITEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPTVKICNYQGPARVVVQLVTALTPVAQLHAHSLVGKQ
CDKGICITDLQPKDSNISFPNLGILHVTKKNVAKTLEERMIEAFRLGYNCGVSIHPEIDV
LQGEVRVPRDLTDHQRSVISSAASLQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSE
PIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDFSGHGGGGGLYRGGGGGPAAGGGPGSGGGGGYFQGFTTYNYGGGG
GVGGVGGGGGFSTGYSAGLAGGGIKHASEGGAADDSSDDSDPDDDSGSGVVLRASALKGN
LEAGERTEEEPEPHRDERLVQVTSRQLEALFQYSVTGDSAYLLAAQRPLMTAQDEDGDTG
LHLAVLHSQKEALKSLTQVVFALPGEEVLNMRNHLYQTPLHLAVITQQREAVEALLLAGA
DPTLTDRHGNTVLHLASQLEGGGGGGGGGMVQFLLKHRELRELLEHTNTAGLCAIHLAVL
ANQLSSLRELLEGGANVEAQERSCGRTALHLATEAENVSLAGCLLLEGNAKVDSLTFNGS
TPLHIAAGRGSIKLTALLMAAGADPKKENFEPLFFKEEDSCDEEREDEDEDEGYIPGTTP
LNMAATTQVLELLNGKEYEPKSPHRSFVPPPGDLVSLDMEVKQQVCRALESEGCWENLAH
SLGLGILNTAFRLSPSPAKTLLDSYEVSGGTIRDLLAGLRAVGDCKALSVLEEALRNNDD
EEQMTNEMSGDSRVHDLKADVRIDSGVCDSGVELSTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgaccactaccttcatacttccaaccagattttagacaacatcatgatg
gatccatcgtgggagttcacacctttccctgtgatgcatcagaccccgtctgtgcggaca
gtggacggaccgttcctgcagatcacagagcagcccaaacagcgcggcttcaggttcagg
tacggctgtgaaggtccgtctcacggcggtctgccaggagcctcgagtgagaagaacagg
aagacttaccccaccgtcaagatctgtaactaccagggtccggcacgggtcgtggtccag
ctggtgacggcgctgacccccgtcgctcagctccacgctcacagtctggtgggaaaacag
tgcgacaaagggatctgcatcaccgacctacagcccaaagactccaacatcagttttcct
aacctggggatccttcatgtgacgaagaagaacgtggcgaagactctggaggagaggatg
atcgaggccttcaggctgggatacaactgtggagtctccatccatcctgaaatcgatgtc
ctgcagggggaagtccgagtcccccgagacctcaccgaccaccagcgcagtgtgatcagc
agcgcggcatctcttcaggctaaagaaatggacctcagcgttgtccggctcatgttcacg
gcgttccttcccgacagtgacggaggtttctctagacgactcgagcctgtcgtgtctgaa
ccgatctacgacagcaaggctccgaacgcctccaacctgaagatcgtgaggatggatcga
accgccggctgtgtgagcggaggagaggaggtctacctgctctgtgacaaagtccagaaa
gatgatatccaggttcggttctatgaagaagatgactcggggttgacctgggaggctctg
ggagatttctccccgacagacgtccatagacagttcgccatcgtgttcaagactccgaag
tatcgagaccagaacctgcagaagcccacgtctgtgtttgtccagctgaagaggaagtct
gacaacgagaccagcgagcccaaacccttcacctaccaccctcagatcatagacaaggag
gaggtgcagaggaagagacagaagacgttgccaaacttccaggacttcagcggtcacgga
ggaggtggaggtctgtaccgaggaggaggtggaggtcccgctgcaggaggaggacctggc
tctgggggaggaggaggttactttcagggctttactacctacaactatgggggaggagga
ggagtaggaggagtaggaggaggtggaggtttctccacaggatactcagctggtctggca
ggaggaggcatcaaacatgcctctgaaggtggcgcagcagacgacagcagcgacgacagt
gatccagatgatgattcggggtcgggggtcgtgctgagagcttcagccctgaagggaaac
ctcgaggcaggggagaggactgaggaggagccagagccacacagagatgagcggttggtt
caggtgaccagcagacagttggaggctctgtttcagtactcagtcacaggagactcagcg
tacctgctggctgcacagcgccccctgatgaccgcacaggacgaggacggagacactggg
ctccatctggcagttctccacagccagaaggaggcgctgaagagtctcactcaggttgtg
tttgcgctgcctggagaggaggtgctcaacatgaggaaccacctctaccagactcctttg
cacctggctgtgatcacacagcaaagagaggcggtggaggcgctgctgttggccggcgcc
gacccaactctgacagatcgtcatggcaacacagtgctccacctggcatctcagctggaa
ggaggaggaggaggaggaggaggagggatggtccagtttctactgaagcacagagagctg
agagagctgctggaacacaccaacacagcaggtctgtgtgcgatccacctggcagtcctg
gccaatcagctgtcttctctcagggagctgctggagggcggggccaacgtggaggctcag
gagcgcagctgtggacggaccgccctccacctcgccaccgaggccgagaatgtgtcgctg
gccggctgcctgctgctggagggtaacgccaaggtggactcccttacctttaatggctcc
acccccctccacatcgctgcagggcggggctccatcaagctgacagctctcctgatggct
gcaggtgcagaccctaagaaggagaactttgagcctctgttcttcaaggaggaggactcc
tgtgatgaagagagggaggatgaggatgaagatgaaggctacatcccaggaaccactccg
ctcaacatggcagccaccactcaggtgttggagcttctgaatggtaaagagtatgaacca
aagtctccacacagatccttcgtccctcctccaggcgacctggtgagcctggacatggag
gtgaagcagcaggtgtgtcgcgctctggagagtgaaggatgctgggagaatctggctcac
agtctgggtctcgggatccttaacacggccttcaggctgagcccctcccccgccaaaaca
ctgctggacagctacgaggtgtcaggtgggacgatcagggacctgttggctggtctgagg
gcagtcggagactgtaaagctctgagcgtcctggaggaggcgctgcgcaacaacgacgat
gaggaacagatgaccaatgagatgagcggtgattctcgggttcacgatctgaaggcagac
gttcggatcgacagtggggtctgtgacagcggggtggagctctccacagcgtga
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