Epinephelus fuscoguttatus (brown-marbled grouper): 125895744
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Entry
125895744 CDS
T08419
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125895744 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
efo04090
]
125895744 (vcam1b)
04091 Lectins [BR:
efo04091
]
125895744 (vcam1b)
CD molecules [BR:
efo04090
]
Proteins
125895744 (vcam1b)
Lectins [BR:
efo04091
]
I-type lectins (Siglecs)
125895744 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
ICAM1_3_5_D2
Ig_C17orf99
C1-set
AltA1
ICAM_N
M157
Motif
Other DBs
NCBI-GeneID:
125895744
NCBI-ProteinID:
XP_049443785
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All DBs
Position
LG10:complement(45344957..45374759)
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AA seq
852 aa
AA seq
DB search
MYSFIHVCIRACDPVRSEMSVCRISVLSAVLLMSSWCVQGLRVDMFPRRPLFRLGERQQL
ECRVQDCPTMPSMSWSLMGDRPLTASISTNRSRSVVTFDPVMMEHEGALLCRVNCGGDQR
QATTPVHVYSFPSAPLITGQDRLHLGAESVLTCQVSDVYPAELLTVSWLQGDVVLQRIVG
DAGSLSVRSEYRFTPQDQDSGGNISCSATLDLQDLPAEDRTRDTTVPLNLLYAPVVTAIS
DSVLVMAGSPLTLSCSAKGNPEPTITWSFRAADNQSEWRRGGHMVVMWAVTLSDAGWYDC
EAWNSEGNQTAGLQVTVHAPPTNTSLLVSPGEQVMEGQQVTFTCHSDGAPPPTLVLRRDG
AELQRTDTASSSSVSFSLSSAHLEDSAHYQCEASNQYGSQLGTSSVTVTAHPLQVDLSSH
VSAAERGSCLLLTCRASGCPHPPTLTWRRTDQNQTVLQRMDQNQTVLQRMDQNQTILQRT
EQDGLSLLRVQDLDLQDQGGYSCEAECGSVIRTGSIQVHVYSFPSDPVLEDPGPVLLGQE
AVLHCNVNSVFSANQMRILWLSGNMTLMSESFSFSGSLQNVSSVLQHLVQEDQQVLTCRA
ELLMEDGDVWRSRTTSVPLQVHYPPRRTSLSVSPGEQVMEGQQVTFTCHSEGAPPTTLVL
RRDGAELQRTDPTSPSLSFSLSSVQLEDSAHYQCEASNQYGSQLVTSSVTITAPPRNTTV
LVLPSTVVQEGQNVTVCCQTISFPPSAVILKKLTNGTELYSTNGTFLLVNVTAKDSGLYQ
VNVTNQLGYQVKVFSISVRERSSSPPPSLSAVIVPVICVAAGLAAAALLLDYLRRSRKKG
FYQLPQSAPPSA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatttattcatgtctgcatcagagcgtgtgaccctgtgaggagtgagatgtct
gtctgcaggatctctgttctctcagctgtgctgctgatgtcatcgtggtgcgttcagggt
ctgcgtgtggacatgtttcccagaaggcctctgttcagactgggcgagcgtcagcagctg
gagtgtcgggtccaagactgtcccacaatgccaagcatgtcctggtctctgatgggggac
cgaccgctgacggcctccatcagcaccaacagaagccgctccgtggtgacctttgacccc
gtcatgatggagcacgaaggagctctgctgtgtcgagtcaactgtggaggagaccagagg
caggccaccacgcctgtgcacgtttactccttcccatcagcccctttgatcacaggccag
gaccgcctacatctgggggcggagtctgtcctcacctgtcaggtgtctgatgtttacccc
gccgagctgctgaccgtcagctggctacaaggagatgttgtcctgcagagaattgttgga
gacgctggatcgctctcggtgcggtctgagtacaggttcacgcctcaggatcaggactct
ggaggaaacatcagctgcagcgctacgctggacctgcaggacctgccagctgaggacagg
accagagacaccaccgttcccctaaacctgctctatgctcctgttgtcacggcgatatca
gactccgtgttggtgatggccggctctccgctcacactcagctgctctgcgaaaggaaac
ccagagccgacaatcacctggagcttcagagctgcagacaaccagtctgagtggaggcgt
ggaggtcatatggtggtcatgtgggcggtgactctgtctgatgctggatggtacgactgt
gaggcgtggaacagcgaggggaaccagaccgccgggctgcaggtcacggttcacgctccg
cccaccaacacctccctcttggtgagtccaggtgagcaggtgatggagggtcagcaggtg
acctttacctgccactcagacggagctccgccccctacactggtactgaggagggatggg
gcggagcttcagaggactgacaccgcctcctcctcgtcggtctccttcagcctctcctcc
gcccatctggaagactccgcccactaccagtgtgaagcctccaaccaatatgggtcccag
ctgggcaccagctctgtcactgtcacagctcatcctctgcaggtggacctgagttctcac
gtctctgcagcagagcggggttcatgtctgctcctcacctgtagagcctccggatgtccc
caccctccaaccctcacctggaggaggacagaccagaaccagactgtcctccagaggatg
gaccagaaccagactgtcctccagagaatggaccagaaccagactattctccagaggaca
gaacaggacggactgtccctgctccgcgtgcaggacctagacctccaggatcagggagga
tacagctgtgaggccgagtgtggctctgtcatcagaactggatccatccaggtccatgtc
tactcattcccatctgatccggttctggaggatcctggtcctgtcctgctgggtcaagag
gcggtccttcactgtaacgtaaacagcgtcttctcagccaatcagatgaggattctgtgg
ctgtcggggaacatgacactgatgtcagagtccttcagtttctccggttccctacagaat
gtctcgtctgttcttcagcacctggtccaggaggatcagcaggttctgacttgcagggca
gagctgctgatggaggacggagacgtgtggaggtccaggacgaccagcgtccccctgcag
gtccactatcctccgaggagaacctccctctcagtgagtccaggtgagcaggtgatggag
ggtcagcaggtgacctttacctgccactcagagggagctccacccaccacactggtgctg
cggcgggatggggcggagcttcagaggactgatcccacctccccatcactctccttcagc
ctttcatcagtccagctggaagactctgcccactaccagtgtgaagcctccaaccagtat
gggtctcagttggtcaccagctcagtcaccatcacagctcctccgaggaacaccacggtc
cttgtcctgccgtctacggtggtccaggagggacaaaatgtcaccgtctgctgccagacc
atcagctttccgccatcagccgtgatcctgaagaagctgaccaatgggacggagctatat
tccaccaacggcaccttcctattggtcaatgtcacggccaaagactctgggctttaccag
gtcaacgtgaccaaccagctaggataccaggtcaaagtgttcagcatcagtgtcagagag
agaagctccagtcctcctcccagtctgagtgctgtcattgtcccagtcatctgcgttgcc
gccgggctcgcagctgccgctctgctcctggactacctgaggaggtccagaaagaaaggc
ttctaccagctgccgcagtctgcccccccttcagcctaa
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