Epinephelus fuscoguttatus (brown-marbled grouper): 125906254
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Entry
125906254 CDS
T08419
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04020
Calcium signaling pathway
efo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125906254 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125906254 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125906254 (grin1a)
Ion channels [BR:
efo04040
]
Ligand-gated channels
Glutamate (ionotropic)
125906254 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
125906254
NCBI-ProteinID:
XP_049460709
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All DBs
Position
LG18:complement(29499295..29544511)
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AA seq
947 aa
AA seq
DB search
MRLFLLAVLFSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQPDGTCKEEMTLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPK
KKASFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcttctcgtgctcctgcgcgcgggccggctgtgag
ccgaaaatcgtgaacatcggggccgtcctgagccagaagagatacgagcaggtcttcaaa
gatgccgtgacccaggccaaccaggtctacggcagggataaattcaagctgaccgccatc
tccgtaacgcacaagcccaacgccatccagatggctctctccgtctgcgaggacctcatc
tccagtcaggtctacgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccaacgcctgtctcctacactgcaggcttctaccgcatccctgtggtggggctcaccacc
cgtatgtccatctactcggacaagagtatccacctgtcctttctgcggacagtccctccc
tattcccaccaggcgcatgtgtggttcgaccttatgcgtgagttcaactggaaccacatc
atcttgatagtgagcgatgaccacgaggggcgggctgctcaaaagaggctcgagaccctg
ttggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggcccgagtcatcattctgtccgcc
agtgaggaggacgctgctgcagtgtacaaggctgcccgcttcctcaacatgaccggctcg
gggtacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgattggcctccagctcatcaacgggaagaatgagtcagcccatatcaatgat
gcggtggctgtggtggctcagtccatccaggagctctttgagaaggagaatatcacggaa
cccccgagaggatgcgtgggcaacaccaacatctggaaaacagggccactctttaaacgg
gtgctgatgtcatccaaatacccagagggcctcacaggacgcgtggagttcaatgatgat
ggagacagaaagtacgcccattacagcatactcaactaccagaagagtcgactcattcaa
gtcggcatctacaatggaacacaggtggtaatgaacaatcagcggaagatcatctggccc
ggaggagagactgagaaaccacagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtatatgtgaaacccactcagccggacggaacatgcaaggag
gaaatgacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggacgcccaattgtgccccagtgttgttatggattctgtattgatctcctcatc
aagttggctatgaccatgaactttacctatgaggtgcatctggtggctgatgggaaattc
ggaactcaggagcgggtgaacaacagtaacaagaaagagtggaatggcatgatgggcgag
ctcctcgggggcctggctgacatgattgtagccccgctgactataaacaacgaacgagcc
cagtacatcgagttctccaaaccctttaaatatcaaggcctcaccatccttgttaaaaag
gaaatacctcgcagtacgctggactcattcatgcaaccgttccaaagcacactgtggctg
ctggtgggtctatcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccgtttggaagatttaaagtaaacagtgaagaagaagaagaagatgccctcaccttatca
tctgctatgtggttctcctggggagtgttgctgaactctggaattggagaaggtgcaccg
cgcagcttctcagcgagaatcctgggtatggtgtgggctggatttgccatgatcattgtg
gcttcctatactgctaacctggctgccttcctggtgttggaccggcctgaggagcgcatc
accggcatcaatgatccacggctgagaaacccatcggacaagttcatctacgccacggtg
aagcaaagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggagtgttcatgctggtggctggtggtatt
gcggcagggatcttcctaatcttcattgaaatcgcctataagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggcggtcaatgtttggaggaagaacctgcagccc
tcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaa
aagaaagcctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgtagg
tcctccaaagacacgcagtacccacccactgacatcacgggccagctcaacttgtctgac
ccgtctgtcagcaccgtggtgtaa
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