Duffyella gerundensis: EM595_1936
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Entry
EM595_1936 CDS
T04258
Symbol
gmr
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ege
Duffyella gerundensis
Pathway
ege02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EM595_1936 (gmr)
Enzymes [BR:
ege01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
EM595_1936 (gmr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_8
PAS_4
PAS_10
GGDEF_2
Phage_CI_C
Motif
Other DBs
NCBI-ProteinID:
CUU24170
UniProt:
A0A0U5L0G5
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All DBs
Position
1:2065454..2067439
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AA seq
661 aa
AA seq
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MTDEQGQTLMYALFGTTSPHWRLTADSDALNFAEDEQAKTNLAIPLTSSQAGLLRAMTVI
TSSVNITLSLRGEYLAMHFVGRKVDQYTWAGSASAWGDTTAVARDLTQGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLCEEYTGLKEQEVIGRNVFQLFMTRQEASESRRNIAGFFRDG
SSYEVERWVKTKKGQRLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQIAQVIEARENSTIGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLDKNQTLARLGGDEFLVLAEDTSQEKMEAMATRILEHLRQPFRIGLIEVYSGCSIGI
ALSPAHGEERESLIRNADTAMYYAKEHGRGRYCLFSAEMNKRVFEYVWLDTNLRKALEQD
QLLLHYQPKIDQGGAVSSVEALVRWNSPERGMVSPGEFIAYAEESGLIVPLGRWVMLTAV
KQIVEWRKQGIMLRVAVNVSARQLIDQSIYLDLQQALQENGLDDCPIDIELTESCLIENE
EKALMLMKQFQQLGAEVHLDDFGTGYSSLSQLARVPIDAIKLDQSFVRDVNTQPVAQSLV
RAIVAVAKALELKVIAEGIETEAEETFVMESGVDVRQGYLYAKPMPAEDIGHWLVKRPAL
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaaacgttaatgtatgccctttttggtaccaccagccctcat
tggcgccttactgcagacagcgatgctcttaatttcgccgaggatgaacaggcgaaaacc
aatcttgctattccccttacctcttctcaggccgggctgcttcgcgccatgacggtaatc
acctccagcgtcaacatcacgctttcactgcgtggcgaatatctcgcgatgcattttgtc
ggccgtaaagttgatcaatatacctgggcgggcagcgcgtcagcctggggcgacaccact
gccgtggccagagatttgacccaggggctgtcgtttgctgagcaggttgtctcggaggca
aactcggtaatcgtgatactcgatcagcggggaaacattcagcgatttaaccgtttgtgc
gaagaatataccggcctgaaggaacaggaagttattggccgtaatgtgtttcagctgttt
atgactcgccaggaagccagcgagtcgcgccgcaatattgctggttttttccgcgatggc
agctcttacgaagtggaacgctgggtgaagaccaaaaaaggtcagcggctgttcctgttt
cgcaacaagtttgtgcacagcggcagcggaaaaaacgaggtttttctaatctgttccggt
acggatatcactgaagaacgacgggcgcaggaacggttacgcgtgctggccaataccgat
acggtgaccggcctgccaaaccgcaacgcgattcaccagcagattgctcaggtgattgaa
gcccgcgaaaactctactattggcgtggtctatcttgacctcgacaactttaaaaaagtg
aacgacgcctacggccatatgtttggcgatcagcttttacaggctgtttcactggctatc
ttaagctgcctcgataaaaatcagacacttgcccgccttggcggcgacgagtttctggtg
ctggctgaagatacctcgcaggagaagatggaagcgatggccacgcggattctggagcac
ctgcgccagcctttccgcatcggcttaatcgaagtctacagtggctgttccatcggcatt
gcgctgtctcctgctcatggtgaagagcgggaaagcctgattcgtaatgccgataccgcc
atgtattacgccaaagagcatggccgtggccgctattgcctcttctcggcggagatgaac
aagcgggttttcgagtatgtctggctcgacaccaacctgcgtaaggcgctggaacaggat
cagctgctgctgcactatcagcctaagatcgaccagggcggcgcggtcagcagcgttgaa
gcgctggtgcgctggaactcaccagaacgcggcatggtgtcgccaggggagttcatcgcc
tatgccgaggagtcgggtctgattgtgccgctggggcgctgggtgatgctcaccgcggtg
aaacagatcgtggaatggcgcaagcaaggcattatgttgcgcgttgcggtaaacgtttct
gcgcgccagctgatcgatcagagcatctacctcgacttacagcaggcgctgcaggagaac
gggctggatgactgcccgatcgatattgagctgaccgaaagctgcctgattgagaatgaa
gagaaggcgctgatgctgatgaagcagtttcagcagctgggtgccgaagtgcatctggat
gattttggtaccggctactcgtcgctgtcacagctggcgcgcgtgcctatcgacgccatc
aagctggatcaaagctttgtgcgcgacgtaaacacccagccggtggcgcaatcgctggtg
cgcgctatcgttgccgtggccaaggcactggagctgaaggtgattgcggaaggcatcgaa
actgaagcggaagagacgttcgtgatggaaagcggtgtcgatgtgcgacagggctacctt
tatgcgaagccaatgcccgcagaagatatcgggcattggctggttaagcgtcctgccctt
ggctaa
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