Sinorhizobium garamanticum: PZN02_005694
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Entry
PZN02_005694 CDS
T09001
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00500
Starch and sucrose metabolism
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
Module
egi_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PZN02_005694 (glgX)
Enzymes [BR:
egi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PZN02_005694 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WEX90321
LinkDB
All DBs
Position
2:1844331..1846436
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AA seq
701 aa
AA seq
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MNVSFSELSFLKPELGAEYTGDGTHFAVFSAHAEKIELCLFSEDGSRETARLPLPKREGD
VWSGYIEGIGPGTLYGYRAHGPYDPHNGHRFNPNKLLLDPYAKQVAGTFVWDDALFGYTI
DGTANDLSFDERDSAPFMVKGVIQDPAFDWDGDEAIRRPWPDTIIYETHVRGMTMTHPAV
PEDLRGTFLGMASDPIIDHLTKLGVTAIELLPVQYFLDDRHLLERGLRNYWGYQTLGFFA
PQARYMKSGRITEFKTMVKRFHAAGIEVLMDVVYNHTAEGSEHGPTLNFRGLDNLSYYRP
SPGKPRHTFDMTGTGNTLNVAHPMVMRMVLDSLRYWVQVMHIDGFRFDLASALGREDMEF
DREGGFFDAIRQDPILAGVKLIAEPWDTGDGGYQLGGFPHPFREWNDRFRDDVRRFWKGD
DGIVPVLAERIAGSPVQFNHSDRGATASINLVGAHDGFTLLDTVSYNDRHNEANGEDNRD
GHPDNHSDNMGVEGATDDEGIKNARARRRRAMFATLMISQGVPMILGGDEFGNSQAGNNN
AYCQDNEIGWLDWASGDEAFLAFCRKMVEFRKENPSLRQERFLNGEPGEGGHFEIAWYRA
DGHLMDEGAWHDEALRIVCVYISRNGVAEATPANGMFLVLNAGADCEISLPRVNGTERWQ
RVLDTASFDAASDDPGLVRAAQDHELVAGQSVTVFIPADNG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttctttctctgaacttagttttctgaaacccgaactcggcgccgaatatacc
ggcgacggtacacatttcgcggtcttttcggctcatgccgagaagatcgaactttgcctg
ttctcggaggatggcagcagggaaacggcgcgcctgccgctgccgaagcgggaaggtgat
gtctggtcgggctatatcgaaggcatcgggccggggacgctctatggctatcgtgcccat
ggcccctacgatccgcacaacggccaccggttcaatccgaacaaactgctgctcgacccc
tatgccaagcaggtcgccggcacatttgtctgggatgacgcgctgttcggatacacgatc
gacggcacggccaacgacctttccttcgatgagcgcgacagcgcgccgttcatggtcaag
ggcgtcatccaggacccggctttcgactgggacggcgacgaggcgatccgccgtccctgg
ccggacacgatcatctatgagacccatgttcgcggcatgaccatgacgcacccggcggtt
ccggaagacctgcgcggcacattcctcggcatggcaagtgatccgatcatcgaccatctg
acgaaactcggcgtaacggcgatcgaactcctgccggtgcaatatttcctcgacgaccgg
catctgcttgagcgtggcctcaggaactactgggggtaccagacgctcggtttcttcgcc
ccacaggcgcgctacatgaagagcggccggatcaccgagttcaagacgatggtgaagcgg
tttcacgctgccggcatcgaagtcctgatggatgtcgtctacaaccatacagccgagggc
tccgagcacggtccgaccttgaattttcgcggtctcgacaatctgagctactaccggccc
tctccgggaaaaccgcgtcataccttcgacatgaccggcaccggcaacacgctcaatgtc
gcccatccgatggttatgcgcatggttctcgacagcctccgctattgggtgcaggtgatg
catatcgacggtttccgcttcgatctcgcgagcgcactcggccgcgaggacatggaattc
gatcgggaaggcggcttcttcgacgcgatccggcaggacccgatccttgccggcgtcaag
ctcatcgcggagccctgggataccggcgacggcggttaccagctcggcggcttcccgcat
ccgttccgcgaatggaacgatcggttccgggacgatgtccggcggttctggaagggggac
gacggtattgtgccggtgcttgccgagcgtatcgccggatcgccggtgcaattcaatcat
tccgaccgcggtgctaccgcgtcgattaaccttgtcggcgcgcatgacggcttcacgctg
ctggacacggtttcctacaacgacaggcacaatgaggcgaacggcgaggacaatcgcgac
ggacaccccgacaaccattcggacaacatgggcgtcgaaggcgccaccgacgacgagggg
atcaagaacgctcgcgcgcgccggcgccgcgccatgtttgccaccctgatgatcagtcag
ggggtgccaatgatccttggcggcgacgaattcggaaacagccaggccggcaacaacaac
gcctattgccaggacaacgaaatcggctggctcgattgggcctccggcgacgaagccttc
ctggccttctgccgaaagatggtggagttccgcaaggaaaatccatcgctccgccaggag
cggtttctcaacggtgaaccgggcgagggtggtcacttcgaaatcgcctggtacagggct
gacggccatctgatggacgagggagcgtggcatgatgaagcgttgcgtatcgtctgcgtc
tacatcagccgcaacggcgtcgcggaggcgacaccagccaacggcatgttcctggtttta
aatgccggcgccgattgcgagatctcgctgccgcgcgtgaatgggacggagcggtggcag
cgcgtgctcgatacggccagtttcgacgcggcaagtgacgaccccggtctggttcgcgcg
gcacaagaccatgagcttgtcgcaggacaaagcgtcaccgtcttcattccggcggacaat
ggctag
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