KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_06882
Entry
EGR_06882         CDS       T05553                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03020  RNA polymerase
egl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EGR_06882
  09124 Replication and repair
   03420 Nucleotide excision repair
    EGR_06882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egl03021]
    EGR_06882
   03400 DNA repair and recombination proteins [BR:egl03400]
    EGR_06882
Transcription machinery [BR:egl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EGR_06882
DNA repair and recombination proteins [BR:egl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EGR_06882
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF6564 Med2
Other DBs
NCBI-GeneID: 36342597
NCBI-ProteinID: XP_024349443
LinkDB
Position
Unknown
AA seq 154 aa
MELLGYGASALVLNPHYRLVNQQLTEYRSVLDNLKSTQLAESVIMLHHLHASNRKKQNES
NPIHELELSNNFTKTYNYATQFSKFNNRETIESVRNLLVQKHFHNFELAAIANLLPDTAE
EARVLIPSLEGPRFPEEELQQILDEIQSKRSFQS
NT seq 465 nt   +upstreamnt  +downstreamnt
atggaactgttgggttatggcgcctccgcgttggtgctcaatccgcattatcgacttgta
aaccaacagctgaccgaatatcgatcggtcttggacaacctcaaatccactcagctggcg
gaaagtgttatcatgcttcatcatttacacgcctcgaataggaaaaagcagaacgaaagc
aaccccattcatgagttggagctatccaacaatttcacaaagacttacaactacgccacc
caattttctaaatttaataatcgcgaaacaatcgaaagcgttaggaacttgcttgttcaa
aaacatttccataactttgagcttgctgcaatcgccaaccttctacccgatacagcagag
gaggccagagttctaatcccaagcttagagggtccacgttttccagaagaagaacttcaa
caaatcttggacgaaatccagtccaaacgaagttttcaatcctga

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