Eucalyptus grandis (rose gum): 104415797
Help
Entry
104415797 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr02010
ABC transporters
egr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104415797
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104415797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egr02000
]
104415797
Enzymes [BR:
egr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
104415797
Transporters [BR:
egr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
104415797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
nSTAND1
AAA_16
AAA_22
Mg_chelatase
BrxL_ATPase
Motif
Other DBs
NCBI-GeneID:
104415797
NCBI-ProteinID:
XP_039156397
LinkDB
All DBs
Position
8:complement(68857488..68872341)
Genome browser
AA seq
1334 aa
AA seq
DB search
MPSLQLLQLTEHGRGLLASRRKSLLLATGILVAGGTAAYAHSRFSKQKSNTFGHFNGIDN
DQEAGRGQESGKKASKKKGGLKSLQVLTAILLSKMGQMGARDLLALIGIVVFRTALSNRL
AKVQGFLFRAAFLRRVPLFFRLISENILLCFLHSTIHSTSKYITGTLSLRFRKILTKLIH
THYFENMAYYKISHVDGRISNPEQRIASDVPRFCSELSDLVQDDLTAVADGLLYTWRLCS
YASPKYVFWILAYVMGAGAMIRNFSPAFGKLMSIEQQLEGEYRQVHSRLRTHAESIAFYG
GEKREASHIQQKFQNLVKHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFAGDLR
PDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVISRELS
GANEKYSSRGNGNQIFSEANFIKFSNVKVLKPTQNVLVEDLTLTVEPGSNLLITGPNGSG
KSSLFRVLGGLWPLVSGHIAKPGVGSDLNKEIFYVPQRPYTAFGTLRDQLIYPLTEDPEV
KKLTRPAMVELLKNVDLEYLLDRYPPEKEINWGDELSXGEQQRLGMARLFYHKPKFAILD
ECTSAVTTDMEERXCAKVLAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYKRDDSP
VLPEAGSNRIMSSETERQNDAMAVQRAFATNAKDSAFSKTKAQSYVSEVIARSPSTDNLS
SLPLVPQLKSSPRILPLRVAALFKVLVPTVFDKQGAQLLAVAVLVLSRTWVSDRIASLNG
TTVKYVLEQDKASFTRLIGVSVLQSAASSFIAPSLRHLTARLALGWRIRLTQHLLKNYLR
NNAFYKVFNMSSRNIDADQRITTDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKLLTGRR
GVAILYAYMLLGLGFLRTVTPDFGDLTSQQQQLEGTFRFMHERLRTHAESVAFFGGGARE
KAMVESRFHELLHHSELLLKKKWLFGILDDFITKQLPHNVTWGLSLLYAIEHKGDRALIS
TQGELAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELEELLDAAAQSGVSA
SDAILPSKSSNLHSEDNISFYKVDIITPAQKLLARKLTCDIVPGKSLLVTGPNGSGKSSV
FRALRGLWPIVSGRLTKPSQSNNETRSGCGIFYVPQRPYTCLGTLRDQIIYPLSHEEAEL
RIAQFNGRDQRSGDSTHLDMHLKTILENVRLNYLLEREGGSWDANKNWEDVLSLGEQQRL
GMARLFFHKPLFGILDECTNATSVDVEEHLYRLAADMGITVVTSSQRPALIPFHSLELRL
IDGEGNWELRLIKP
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagttgctgcagttgacggagcatggtcggggtcttctggcttcccga
aggaaatcccttcttcttgccactggcatcttagttgctggcggcactgctgcatatgct
cattcccgttttagcaaacagaagtccaatacttttggtcattttaatgggattgacaat
gaccaagaggctggcagaggtcaggaaagtggaaaaaaagctagtaaaaagaaaggtgga
ttgaagtcactgcaggtccttacagccattctactatctaagatgggccagatgggtgca
agggaccttttggctctaattggtatagtggtatttcggacggctttgagcaatagatta
gcaaaagtgcaaggttttttgtttcgtgctgcttttcttcggcgcgttccactattcttc
cggctgatttcagaaaatatcctattatgctttcttcattccacgatacactctacttca
aagtacataacagggacactcagtctgcgttttaggaagatattgacgaaattgatccac
acccattacttcgagaatatggcatactacaaaatttcccatgttgatgggcgcatatct
aatccagagcaacggatcgcaagtgatgtaccaaggttctgttcagaattgagcgatctt
gtgcaggatgatttgacagctgtagcggatggcctgctttatacctggcgcctatgttct
tatgctagcccaaaatacgttttttggattttggcatatgtaatgggggcaggggccatg
atcagaaatttctctcctgcttttgggaaactaatgtccatagagcaacaactggaagga
gaatatcggcaggtccattctcggttgaggacccatgcagaaagtatagcattttatggc
ggagaaaagagagaagcatctcatattcagcagaagtttcaaaatctggtgaagcacatg
agagttgtccttcatgaccattggtggtttggaatgatccaagacttcttgttgaaatat
ctaggtgctacagttgctgttatcttgattatcgaacctttctttgctggtgaccttaga
cccgatacttcaactctgggacgtgctgaaatgttgagcaatttgagataccataccagt
gtcatcatatccttgtttcaatctcttggtacactgtctataagttcaagacggctcaat
cgtctcagtggttatgcagaccgcattcatgaattaatggtcatatcaagagagctaagt
ggtgccaacgaaaaatattcttctcgaggaaatggaaaccaaattttcagtgaagctaat
ttcataaaattttctaatgtcaaggtactcaaaccgactcaaaatgttttggtggaggat
ttaactttaacggttgaaccagggtcaaatcttttgattacaggaccaaatggcagtggg
aaaagttcgctttttcgagttctaggaggcctgtggccacttgtatccggccatattgca
aaacctggcgttggttctgaccttaataaggagatattctacgtgccgcaacgaccgtac
accgcttttggcacacttcgtgaccagctgatttatcctcttacggaagatccggaagtt
aaaaaactcacacgacctgcaatggtggagctgctgaaaaatgttgatctggagtatttg
ttggaccgttatccaccagagaaagagataaattggggtgatgaattatctnttggggag
cagcagagattagggatggctaggctattctaccacaagcctaagtttgcaattcttgat
gagtgcacaagtgctgtgacaaccgatatggaggaacggntttgtgctaaagttctggct
atgggaacatcatgcataaccatttcacataggcctgcattggttgcgtttcatgatgtg
gttttgtccctggatggtgaagggggctggagcgtgcactacaagagggatgattctcct
gtcctccctgaagctggaagcaataggattatgtcttctgagacagaacgccagaatgat
gcaatggccgtccagcgagcatttgctaccaacgcaaaggactctgcattttcaaaaaca
aaggcacagtcatatgtatcagaggtgattgcaagatctccttctactgacaatcttagt
tcattgcctcttgtcccacaacttaagagctcaccgaggatattgccattgagagtagct
gccttattcaaagtattggtaccaacagtgtttgataaacaaggtgcacaacttcttgcg
gtcgctgttcttgtattatcaagaacatgggtatcagatcgtattgcctcgttgaacgga
accactgtgaagtatgtcctagagcaggacaaggcatctttcactcggcttattggtgtt
agtgtcctgcaaagtgctgcatcttccttcattgcaccttctttgaggcatctgacagca
aggctagcccttgggtggaggatacgcctgacacagcatctactgaagaattatcttaga
aacaatgcgttctacaaggttttcaacatgtcaagcagaaacatagatgctgaccagagg
ataactactgatcttgaaaagttaacaactgatttgtcaggattagtcactggaatggta
aagccatctgttgacattctctggttcacctggcgaatgaagcttttgacgggtcggagg
ggtgttgccatattgtatgcttacatgttactaggtttgggtttcttaaggactgtgact
cctgactttggcgacctgactagtcaacaacaacagctagaaggaacctttaggttcatg
catgaaaggctgcgcacacatgctgaatctgtagctttctttggtggtggtgcccgagaa
aaagctatggttgagtcaagatttcatgagcttctacatcactctgaattgttgttgaag
aaaaaatggctttttggcatcctggatgattttatcaccaagcaactaccccataatgtt
acatggggtctgagcttgttgtatgctatagaacacaagggagacagggccttgatttct
actcaaggtgagctggcacatgctttgcggttcttagcatctgtagtgtctcagagcttt
ttagcatttggcgatattctcgagttgcacagaaaattccttgagctctccggtggtatt
aatcggatttttgagcttgaagagcttctagatgctgctgctcagtctggggtatctgca
tctgatgccatattgccatcaaaaagcagcaatcttcattctgaagacaacatttcattc
tataaagtggacatcataaccccagcacagaaattgcttgccaggaagcttacgtgtgat
attgtacctggaaagagcttacttgttactggtcccaacggtagcggcaagagttctgtt
tttagagctctgcgaggtctttggcccatcgtaagtggaagactcacaaaaccatcccaa
tcaaataacgaaactagatcaggttgtgggattttctatgttccccaacggccatataca
tgcttaggaactctgagggatcaaattatatatccactttcacacgaggaagcagagctc
agaatagcacagtttaatgggagagatcagagatcaggtgactcgacccacctagacatg
cacctgaaaactattcttgagaacgtcagattaaattaccttctggagagggagggaggt
agttgggatgctaacaaaaattgggaagatgtcctttctctgggagaacaacagagattg
ggcatggcacgattattcttccacaagcccctgtttggcattctcgacgagtgcactaat
gccacgagtgttgatgtcgaggaacacttgtataggcttgcggctgatatgggtataact
gttgtcacttcctcgcaacgtcctgctcttattccattccattcgttggaattgcggctt
atcgatggtgagggtaactgggaacttcgtttaatcaagccatga
DBGET
integrated database retrieval system
