Eucalyptus grandis (rose gum): 104422539
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Entry
104422539 CDS
T03547
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104422539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104422539
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104422539
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104422539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104422539
NCBI-ProteinID:
XP_010033188
LinkDB
All DBs
Position
10:27144358..27166144
Genome browser
AA seq
1393 aa
AA seq
DB search
MKAASHVFTKEPYVENVGPRRIKSIHFSMFSASEIGNVAEVQVYKGVYYDGTRKPLEGGL
LDPRMGPANKSCRCSTCHGDFKDCPGHYGYLTLALPVYNVGFLDKILEVLKSLCKSCSRI
LLDEESRRKELEKIRHPKRDALNKAELAKKTVSKCKPGRCAHCGYINGTVKKAIGAISYI
HDRSKTSDRSLEECKSAISHTKESKGSLSVASNIINPRDVLSLFERMSDEDCELLNIADR
PEKFMITTIAVPPIAIRPSVMMEGSQSNENDITERLKRIIQVNASLQQELQDMKNMAAWD
HLQAEVGLYINSDVRGVPYPFQVAKPLAGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISP
DPNLKITEVAIPIQMARILTYPERVNQYNIEKLRQCVRNGPYKYPGARMIRYPDGEMRLL
MGSFRKRLADELGFGVIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESV
CNPYNADFDGDEMNMHVPQTEEARAEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLI
TRKDIFYDRAAFSLICSYMGDGMDLIDLPTPAIIKPIELWTGKQIFSVLLRPNARMRVFV
NLTLKEKNYSKPKNASERELETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSILL
RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPDNDLNERKRETILNGYNSCDEKI
ELYNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQVCMKKLHWRNSPLIMSQCGSKGS
PINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATEFF
FHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMD
PALMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLSDA
SKAFKKSVKAFLLEEHEKGSEIIMKFGEDATVENQETVIRVAQKIGGITEGQLRAFIDTC
MSRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK
KILTPIITAELDRDDNVNIARMVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIE
DSQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPN
VIVKGIKTVERAVVNKGKEKYKDKEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSN
HIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQ
KMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKP
ELTYASDPIISAY
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggcgtcgcatgtgttcaccaaggagccttacgtcgagaatgtcgggcctcgc
aggatcaagagcattcatttctcgatgttctccgcctcggagatcggaaatgttgcggaa
gttcaggtgtataaaggcgtctactacgacgggactcgtaagccgttggagggcggcttg
ttggatccacgcatgggtcctgcaaacaagagttgcaggtgcagtacatgccatggagat
tttaaggattgtccagggcattatgggtacctgactctcgctctacctgtctataatgtt
ggatttcttgacaaaattctggaggtcttgaagtctttatgcaagtcatgttcacggata
cttttggatgaggaatcacgcagaaaagagttggagaagataagacatccgaagagggat
gctttaaacaaagccgagcttgcaaagaaaacagtcagcaagtgtaaaccagggagatgt
gcccattgcggatacataaatggcacagtgaaaaaagccattggtgcaattagctacatt
catgaccgttcaaagactagtgacaggagcctggaagagtgtaaatctgcaatttcccac
acaaaagagtccaaggggtccttgagtgtggctagtaatatcattaatccccgggatgtt
ctgtctctctttgaaaggatgtcagatgaggattgtgaattgctcaatatcgcagacagg
ccagagaaatttatgataacaaccatagctgtgccaccaatagcaattcgtccttcagtc
atgatggaaggatcgcagagtaatgaaaatgacatcacagagaggttaaaaagaattatt
caggtcaatgcttcacttcagcaagaacttcaagacatgaaaaatatggctgcctgggat
catctccaagctgaggttgggttatatataaacagtgatgttcgtggtgttccataccct
ttccaagtagccaaaccattggccggtttcattcagcgtcttaaaggaaagcaggggcgt
tttcgtggaaatttatctggtaagcgagtggagtatactggaaggacagtcatatcacct
gaccccaatctgaagataacagaggttgcaatccccatccaaatggctcggatcttgact
tatcctgagcgtgtcaaccaatacaatatcgagaaattgagacaatgtgttcgcaatggc
ccttacaagtatcccggtgcaaggatgattagataccctgatggtgaaatgaggcttctg
atgggaagctttaggaagcgccttgctgatgagttaggatttggtgtcatagtcgaccgc
cacttggaagatggtgatgttgttcttttcaacagacaaccaagcttacatcggatgtct
atcatgtgccatagggcaagagtaatgccatggagaacattgagattcaatgaatctgtt
tgcaacccatataatgccgattttgatggagatgagatgaatatgcatgttcctcaaaca
gaagaggctcgtgcagaggctttaatgttgatgggggtgcaaaacaatttatgcaccccc
aaaaatggagaaattttggttgcttcaactcaagattttcttacatcctcttttctcata
acaaggaaggacatattctatgaccgggcagccttttccctcatatgttcttacatggga
gatggcatggatctcattgatctgccaacgccagcgataattaagccaatagaactctgg
acaggaaagcagatatttagcgttttactgcgccccaatgcacgcatgagagtcttcgtg
aatctgactctgaaggagaaaaattatagcaagcctaaaaatgcgtcagagagggaacta
gaaacgatgtgccctaatgatggttttgtttatttccgtaacagtgagcttatatcggga
caacttggaaaggcaactttaggtaatgggaacaaggatggtctttattctatcctcctc
agggactacaatgcacatgctgctgcttcttgtatgaatcgtcttgctaaactgagtgcc
cggtggattggaaatcacgggttctccattggtattgatgatgtacaaccggataatgat
ctgaatgaaaggaagagagagaccattttgaatggttataatagttgtgatgaaaaaata
gagctctataacaaaggaaagctggatctccaacctggttgtgatgctgctcaaacactg
gaggctgtgatcactggtattttaaatcaaattcgaaatgagactgggcaggtgtgcatg
aagaaactccattggagaaatagtccattgatcatgtcacaatgtggttcaaaaggatct
cccatcaatattagccaaatgattgcatgtgtcggtcagcagtcggttgggggtcgtcgt
gcacctaatggattcattgatcggagtcttcctcattttccaagacaatcgaagacacct
gcagctaaaggtttcgttgccaattcattttacagcggtttgacagctacggaatttttc
tttcatacaatgggaggacgagaaggcctggttgatacggcggtgaaaacagctgatact
ggctacatgtctcgtagacttatcaaggctttggaagacttgtctattcattatgacaac
acagtaagaaatgcaagtggatgcattgttcaattcctttatggtgacgatggcatggat
cctgcacttatggaaggaaaaaatgggttccctttgaatttcgacagattatttatgaaa
gtgaaggcaacttgcccttctagagaacataagtatctatctcctgtggaaatatctgca
ttgatagaacaaaagctaccagaaagtgaaagtactccggatggagggctctcagatgct
tccaaagccttcaagaaatctgtgaaagccttcctacttgaagaacatgagaaaggatcg
gaaatcattatgaagtttggtgaagatgcaacagtggaaaatcaggagactgtcattcga
gttgcccagaaaataggtggaattactgaaggacagctaagggcctttatagacacctgc
atgtctcgttatcatttaaaaagaattgaagctggaagtgcaattggagcaattggggct
cagagtattggagaaccagggacacagatgacactcaaaactttccattttgctggtgtt
gccagcatgaatgtaacacttggagttcctcgtattaaagagatcataaatggagccaag
aaaatactcactcccatcatcactgcagagctagatcgtgatgataatgtgaatattgct
aggatggtaaaggctaggattgataagaccgttttaggccagattgcaaagagcataaag
actgttatgacttcaagattagggtcaatagtcatcacgcttgacatgaatagaattgaa
gactcacagttatgtatagatgctaatactgtgagagagtcaattatgcaaactccaaaa
attaaaccgaagcagctgcaaattaatgttttggatgttacaaaattggaagttgttcct
ctggttgatagaggtaaacttcattttgagctccattccctcaagaatatgcttccaaat
gtcatagtgaagggaatcaagacggttgagcgtgcagtggtaaacaaagggaaagaaaaa
tataaggacaaggaagggaaggtgaaggagagggagaagtacagtcttgtagtggaaggc
acaggtctgcaagaagtcatgggcaccgaaggtgttgatggtcggaaaacgaaaagtaat
catatcattgagatacagcagacgcttggaatagaagctgctagatggtgcatcattgag
gagatacagttcatcatgtcgaatcatggcatgagcatagacatacgccatatgatgctt
ttggcagatctaatgacttttcggggtgaagttcttggcattacaaggttcggcatacag
aaaatggacaaaagcgttttgatgttggcttcattcgagaaaacatctgatcacctgttc
cacgcttctgcaagtggtaaggctgacaaaattgaaggtgtcagtgaatgcatcatcatg
ggggtgccaatgcaattgggcacaggaattttgaaagtgatccaaagggatgaaaaacca
gaactgacatatgcatcagatccaatcatatcagcttattga
DBGET
integrated database retrieval system