Eucalyptus grandis (rose gum): 104425813
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Entry
104425813 CDS
T03547
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
egr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104425813
09124 Replication and repair
03420 Nucleotide excision repair
104425813
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
egr01001
]
104425813
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104425813
03019 Messenger RNA biogenesis [BR:
egr03019
]
104425813
03400 DNA repair and recombination proteins [BR:
egr03400
]
104425813
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
104425813
2.7.11.23 [RNA-polymerase]-subunit kinase
104425813
Protein kinases [BR:
egr01001
]
Serine/threonine kinases: CMGC group
CDK family
104425813
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104425813
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
104425813
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104425813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
HYPK_UBA
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
104425813
NCBI-ProteinID:
XP_010036922
UniProt:
A0A059A439
LinkDB
All DBs
Position
11:43857424..43863428
Genome browser
AA seq
418 aa
AA seq
DB search
MTEMDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQVVAIKKIRIGKQKEGVNFTALR
EIKLLKEIKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAVCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGPAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTASQWPDMV
YLPDYVEYQYVPAPPLRSLFPMTSDDALDLLAKMFTYDPKNRISVQQALEHRYFSSAPLP
TVPDKLPRPAPKRESLNSKTSDFNPPEGPTVLSPPRKSRRVMPEREGFDGNAYQNDKFDD
HVSEVRTGPGEHTSRNEQVPMSLDFSIFGARPPNRPTINSADRTHLKRKLDLEFQHPE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatggatctgtcgaagaaggtcgccgataggtacctgaagcgggaggtgctc
ggtgagggtacgtatggcgtcgtctacaaagccatcgacaccaagactggacaagttgtt
gcaatcaagaaaattcggattgggaagcaaaaagaaggggtgaacttcactgcccttaga
gaaataaagttgcttaaagagattaaagatccaaacatcatcgagttgattgatgccttt
cctcacaaagggaacctgcatcttgtgtttgagttcatggagactgatctcgaagctgtc
atccgtgatcgtaatatatttctttcaccagctgacataaaatcataccttcagatgacc
cttaagggccttgctgtttgccataaaaaatgggtgttgcacagggatatgaagcctaat
aatttgctgataggacctaacgggcagcttaaacttgcagattttggtttagcccgcata
tttggcagtccagaccggagatttacacatcaggtttttgcccgttggtatagagcacct
gaactgttgtttggcaccaagcaatatggtccggctgtggatgtgtgggctgcagcttgc
atatttgcggagcttcttcttcgtcggccctttttacagggttcaagtgacatcgatcaa
cttggaaagatctttgcagcttttgggactccaacagcttctcagtggcctgacatggtg
taccttccagattatgtggaataccagtatgtcccagcacctcctcttcgttcactcttt
cctatgacaagtgatgatgctctggacttgttagccaaaatgtttacctatgatccgaag
aatagaatttctgtacagcaggctctggaacacaggtacttctcatcagctcctctgcct
accgttcctgataagctacctcgaccagctccgaagcgggaatcacttaattctaaaaca
tcagactttaatccccccgagggtcccactgtgttatcacctccaagaaagtccaggagg
gtgatgccagaacgagaagggtttgacgggaatgcgtatcagaatgataaatttgatgat
catgtcagtgaagttagaactggtcctggagagcatacaagcagaaatgagcaggttcct
atgtcactagatttttccatatttggtgccagacctccaaatagaccaacaatcaacagc
gctgaccggacccatctgaaaaggaagctagatcttgaattccagcatccagaatga
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