Eucalyptus grandis (rose gum): 104427119
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Entry
104427119 CDS
T03547
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104427119
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104427119
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
104427119
NCBI-ProteinID:
XP_010038560
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Position
11:7616821..7618436
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AA seq
407 aa
AA seq
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MGSKMMARAAIFLYLLSLAAAMRTGGVSMIGQAEIDVRKFGAKADGRSDDSQIIVNAWNK
ACTSPSPSTVVISKGSYLAGPLKFQGPCKADVNLKVEGAVKAPADLNKFKSQGSWVLFQN
IEGLTLSGGGSFDGQGAAAWKENNCAQTGKCNSLPTNLQFTSINNSHVQDITSLNSKLFH
VELLNCNNVTLQHVTIDAPEDSLNTDGIHVGRSTGVNIIGADIRTGDDCVSLGDGSQQVH
IEGVTCGPGHGISVGSLGKYHDEQPVVGVTVRNCTLTNTMNGIRVKTWPNSPSGVASGMH
FEDITVNNVSTPILIDQNYCPYNNCQQKIPSKVKISDVSFRNIRGTSATPLAVKLVCSRG
VPCQKVELADINLRYNGRNGTATSQCENVKPTIAGKLSLPICAGPRS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagatgatggccagagctgcaattttcctttatctgctctccctagcggct
gccatgagaactggaggtgtttccatgataggtcaagccgaaatcgacgtgagaaaattt
ggagcgaaagccgacggaagatccgacgatagccagattattgtgaatgcctggaataag
gcatgcacgtctccaagccctagcacggttgtgatatccaaagggagttacctggcgggc
ccgctgaaattccaagggccatgcaaggcggacgtcaacctgaaggtcgaaggggccgtc
aaagcaccggcggacttgaacaagttcaagtcgcaaggctcctgggtcctgttccagaac
atcgaaggcttgaccctttccggcggcgggtcgtttgatggccaaggtgcggccgcctgg
aaagagaacaactgcgctcagaccggcaaatgcaattccctccccacgaatctgcagttc
acctcgatcaacaactcgcacgtccaagacatcacctccctcaacagcaagctgttccac
gtggagctcctgaactgtaataacgtgacgctccagcacgtcaccatcgacgcgccggaa
gacagccttaacaccgacgggatccacgtgggccgctccacgggggtcaacatcattggt
gccgacatcaggactggcgatgactgtgtctcgctcggtgacggaagccagcaggtgcac
atcgagggcgtgacgtgcgggcctggccatggcatcagcgtcgggagcctcggcaagtac
cacgatgagcagcctgtggtcggcgtgaccgtgcgcaactgcaccctcaccaacacgatg
aacgggatccgcgtcaagacgtggcctaactccccgagcggcgtagccagcggcatgcac
ttcgaggacatcacggtgaataacgtgtccacgcctattctcatcgatcaaaactactgc
ccgtataacaattgccagcagaagattccttcaaaggtcaagatctcagatgtgagcttt
aggaacatccgaggaacgtctgcaacaccacttgctgtgaagcttgtgtgcagcagagga
gtcccttgccagaaagtggagcttgctgatattaacctgaggtataatgggagaaacggg
actgccacatcgcagtgcgagaacgtgaagcctacgatcgccgggaaattgtctctgccc
atttgcgcggggccacgaagttga
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