Eucalyptus grandis (rose gum): 104454525
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Entry
104454525 CDS
T03547
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104454525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104454525
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104454525
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104454525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
104454525
NCBI-ProteinID:
XP_010067710
UniProt:
A0A059BJ30
LinkDB
All DBs
Position
7:58273334..58289357
Genome browser
AA seq
1173 aa
AA seq
DB search
MGATKADAADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAK
PEVYQPQKEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAVHEKFNFGHLPI
MLKSKLCYLNGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFR
DRREGYTDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDT
NDHEIYSSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQ
PVMDGLENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSL
QNQEVLLPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGR
QIGSAIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTT
SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVL
IGIGMTPSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDL
EVGYVPLSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDG
GDGGRRNEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHF
RADQKLYHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEP
YCSVYNEVTTTTKNHLRKGSESAIVDYVAVDTKTKKGLQKANIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFV
DATPFASSTKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLLH
DRLHTCSDYHIADVCSLCGSILTTQFVQPQRRPGREIGGLPPIRAPKKVTCHACQTSRGM
ETVAMPYVFRYLAAELAAMNIKMTLHLSNGAGA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgacgaaggccgatgcggccgactacggggcgctgcgggagctgttccggcac
cacatagagtccttcgaccacctcgtcgaccgcggtctggagaccatgctcgacaagatc
aagcccgtccagattttcgatccctcctccgacaagacgctcaagatctggtttgcaaaa
cccgaggtatatcagcctcaaaaggagggcagttcgaagacgagtcacgatgctctgtta
ccattcgaatgcaggcaagctaaaacttcctacgccgggaagttcgtggtgcacctctat
tttcaatacgatgataaggttgctgtacacgagaaatttaatttcgggcatcttccaata
atgttaaagtcaaagctttgctacttgaatggcgctgatccgcaaaagttggtttcttgg
aaagaagaatcttctgagatgggtggctatttcatcttgaatgggctagagagggtggtt
cgtcttctgatattgcctaagcggaactatccaatgagcatggtgcggaattcatttcgt
gaccgacgtgaaggatatactgacaaagcagtagtaataaggtgtgtcagagaagaccag
tcctctgtgacagttaaactatattaccttcaaaatggtagcgcaagacttggattttgg
attcaggctagagagtatttgcttcctgttggcgttgttttgaaggcacttattgacacc
aatgatcatgaaatttattctagtttgacaagttgctatagtgagaaatatgggagaggg
aagggtgttgtgggtaatcaacttgtgagtgaaagggctaagattatacttgatgaactt
cgagatctgactctttttacacgacgccaatgtctgcaacatatcggagagcatttccaa
cctgttatggatggtctagaaaacgaaagttttatctccgttgcaaatgctgttcttcag
gactacatttttgtccaccttaataacaactatgacaagttcaatcttctcatctttatg
gtgcagaagcttttttctcttattgaccagacttcaagtccagataacccagattctttg
caaaatcaggaagttttactgcctggtcacctgattacaatttatttgaaggacaaacta
gaagattggctacaaaaggcaaaaaagcttcttcaagacgagttgaagaacaaagctaaa
aactttgatttctctagcttggcacatgttaagaaggtcatggacaaaaatcccggaaga
cagattggttcagccatagaaaatatgttaaaaactggaaggctcgttacacaatcgggt
ctggatttgcagcagagggcaggctatacagttcaagcggagaggctaaacttcctgcgt
tttctctcacattttcgggctgtacataggggtgcatcctttgcagggttgcggacaacg
agtgttcgaaaattgttacctgaatcttggggttttctttgccctgtacacactccagat
ggggaaccttgtggtttgctgaatcatatgacttgcacctgtaggatcacatcctttttt
gattcaaaaggaaactttcgagattttgtcaagataagaacttcaattctaaatgttctg
attggaattggaatgacaccttcactccccaaaatcgtccaagctggccctcctgatgtt
ctctcggtccttctagatgggcgtgttgtgggttctattccctctgctgaagttgaaaag
gctgtttcttatttgcgtagattaaagctgtcaactacttcagggattcccgatgatctg
gaggtgggatatgttcctttgagctttggtggggcatatcctggcctttatctatttaca
aacccttcaagatttgcgcgcccagttagaaatatatctgcacccgtagatggaagccaa
aacattgaactcattggtccatttgagcaggtgtttatggaaattagatgccctgatggt
ggagatgggggaagaagaaatgaatttcctgcaactcatgaagagatccatccaactgga
atgctcagtgtggttgctaacctcacaccatggtcagatcataatcagagcccacgaaac
atgtaccagtgtcagatggcgaaacaaacaatggctttctcttcacaagccattcacttc
cgtgcggaccaaaaactgtatcatcttcagactcctcaaactcccatagtaagaacaggt
gcatacacaaagtattgcatagacgagtttccaaccgggacaaatgcaattgttgctgtg
ctggcttattcagggtatgatatggaggatgctatgattctgaataagtcatctgtagaa
cgtggaatgttccatggacaaatataccagacagagaccattgacttatctgagcaaagt
agcaaatctgatcgagaacagaggatgtttaggagaagtaacactgataaatcagctcac
ccttggattgattctgatggacttccatatgttggtcagatgatacgtccaaacgagccg
tattgcagtgtatataatgaggtgacaactactaccaaaaaccatctacgaaaggggtcg
gaatctgcgatagttgattatgtggctgtcgatacaaaaaccaagaaaggtcttcaaaag
gcaaatatacgttttcggcatccaaggaatcctgtaattggtgacaaatttagcagtagg
catgggcagaaaggtgtttgctcacagttgtggccagatgtagatatgcctttttcagga
ataacaggaatgcgtccagacttgataattaatccccatgcatttccttccaggatgaca
attgctatgcttctggagtccattgctgctaaggtgggcagcttagatggtgaatttgtc
gatgcaactccattcgctagctccactaaaaaagctaacggggaagagaaatctgagtct
gaattgcttgtggatcaaattggggccaagttaaggaagaaagggttcaattaccatggg
gtggaagtgctgtacagtggtgtctatggaacagaactcacatgtgagatctttattggg
cctgtgtattatcaacgactaaggcacatggtctcggacaagtttcaggttcgctccact
ggaacagtagaccaggtcacacgccagcccatcaaaggaagaaaacgaggtggaggcatc
cgatttggggagatggaacgagattccatggttgcacacggggcggcgtatttattgcac
gataggctacacacgtgttctgattaccatattgctgatgtatgctccctttgcgggagc
atcctcactacgcagtttgtccagcctcaaaggcgtccgggccgggagattggagggctc
ccacctattagggctcctaaaaaggtcacctgccacgcgtgccagacgagcagagggatg
gaaaccgttgcaatgccttatgttttcagatacttggctgctgagctagcggcgatgaac
atcaaaatgaccttgcatttgagcaatggagccggagcctga
DBGET
integrated database retrieval system
