Elaeis guineensis (African oil palm): 105055234
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Entry
105055234 CDS
T03921
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X3
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105055234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egu03400
]
105055234
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105055234
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105055234
FA (Fanconi anemia) pathway
Downstream FA components
105055234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
105055234
NCBI-ProteinID:
XP_010935304
UniProt:
A0A6I9RZR1
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All DBs
Position
12:complement(20596158..20618569)
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AA seq
1164 aa
AA seq
DB search
MTAAMDPKTPSQSPNPSSKQNVYQIGGVPVEFPYRPYGSQLAFMGRVISTLDRARRQGHC
HALLESPTGTGKSLALLCSSLGWQQHQRSILLATTTQPTPDPLLHGGGFIPEPMPSRNSE
QPPPATSARAQKRLLAPKIFYATRTHSQISQVIREFRKTSYRVPMGILASRKHYCINKNV
CMKDSVDEECKLLLKDPQNLGCVEFKNANKLKAHPSLQQGGCHEVHDIEDLVKVGRTVKG
CPYFAAQILAEEGQIVFCPYSYIINPIVRRAMDVDIKGCIVILDEAHNIEDMAREAGSID
AEEEVLFKMQTELGQLCMIDHVAMIYRPLYDMIQGIISWISDRKNNLQKHEFENYSSCWT
GDKAIRELQQAGITQQCFPILQECATKAIKAATDAEPGEIYLSGISSITLEGLFSSLNYF
FSENGSHALDYQLALQQHVKRDGSNAASGLKCTFSLWCLNPAIVFREIANFSLSVILTSG
TLSPMGSFASELGVQFEVSMEVPHVIDVDSQLWAAVIPSGPANCPLNASYKMADGYPFQD
ALGASLEEICKIVPSGALVFFPSYKLLEKLRDRWCQTGQWARLNAQKPIFVEPRGNVDEF
EAVLRGYYDAIHGNNKTSHGKTRYGLKRVSKHLPTKESPQNSIKGGAALLAVCRGKVSEG
IDFSDENARVVVIVGIPFPNINDVQVMLKKKHNDAYKVSKNLLSGSEWYCHQAFRALNQA
AGRCIRHRFDYGAIILLDERYKEERNLAYISKWIRNSIKQYRNFDESLKGLRDFFQNVER
QIGPKSKEATCENALQTDLLIPETNKEVSCSSKQSISDRGLPQKKNQKAKRLNRQNRRKM
VPQNTVAIAESSQLAKDSSPTIVDDSPVSLLNAQCSRKVEAAGERNKKLLNSSTSCIDFE
NITPVSSKYSDTISVESSENILHQSLAIENTVIEAQIASPRDTSDDKSAYSAANTCNQSL
DGPSFSLSTTITNVADTPEKPPYADVFNSEQDSSLNMSVNSHSQKRRRIMFSQLSSCTQT
GRLSCPGAEYLCQVDKRIFDRCTKDGAPQHDVWSEEDGCVFRTLSCPFCTVPKTLGVQVM
ATDASNVHLLNKVFFHADHVDMTREQTPKQEATPVCASVPSRGSSVIEIERYVYNPQPKN
LTKAKLRLPKRDHISSDHQDGDGT
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggcgatggatcccaaaaccccctcccaaagccctaaccctagctctaaacaa
aacgtctaccagattggaggcgtccctgtggagttcccctataggccctatggttcccag
ctcgcgttcatgggacgtgtcatctccaccctcgaccgcgctcgccggcagggtcactgc
cacgccctcctcgagtcccccaccggcaccggcaagtctctcgccctcctctgctcctct
ctcggctggcagcagcaccagcgcagcatcctcctcgccaccaccacccagcccaccccc
gatccactcctccatggcggcggcttcatccctgaacccatgccttcaagaaactcggag
cagcctcctccagctacgagcgctagggctcagaagagactgttggcacctaaaattttc
tacgccacgaggacgcattctcagataagtcaagtcattcgtgagtttaggaagacgtca
taccgcgtgccaatgggaattctggcatcacggaagcactattgcatcaataaaaatgta
tgcatgaaggacagtgtggatgaagagtgcaaattgctactgaaggacccacaaaatcta
ggctgtgttgagttcaaaaatgcaaataagctcaaggctcatccgtcccttcagcaaggt
ggttgtcatgaagttcacgatattgaagatcttgtgaaagttggccggactgtgaaaggt
tgtccatattttgctgcacagattttggcagaggaaggacaaatagttttctgtccttac
agctacatcataaatccaattgttcggagagcaatggatgttgatattaaaggatgcatt
gtgattcttgacgaggcccacaacatagaggacatggcacgggaggctggcagtatagat
gctgaagaagaagttctttttaagatgcaaacagagctagggcaattatgcatgattgac
catgttgcaatgatataccgacctttatatgacatgatccagggaattattagttggata
agtgacaggaaaaacaacttgcaaaagcatgaatttgagaattactcttcatgttggact
ggggataaagctatcagagaacttcagcaagccggaattactcagcaatgctttccaatc
ttgcaagaatgtgccacaaaggcaattaaagctgctacagatgcagagccgggagaaatt
tatttaagtggcatctcatctattaccctggagggactgttttcctcgcttaattatttt
ttctctgaaaatggatctcatgcacttgattatcaacttgcgctgcagcaacatgttaaa
agagatgggagtaatgctgcaagtggtttgaaatgcacattcagcttatggtgccttaat
cctgctatcgttttccgagagattgcaaacttttctctttcagtaattcttacatctgga
acactctccccaatgggttcatttgcatctgaacttggagtacagtttgaagtttccatg
gaagtaccacatgtaattgatgtggattcacagctttgggctgcagtaattccctctggc
cctgcaaactgtccattaaatgccagctataaaatggccgatggatatcctttccaggat
gcacttggagcttctctggaggaaatatgtaagattgtaccaagtggtgcccttgttttc
ttccctagctataagttgctggaaaaactacgtgatcgctggtgtcagactggtcaatgg
gctcggttgaatgcccaaaagcccatctttgttgaaccaagaggaaatgtggatgaattt
gaagctgttctgagaggatactatgatgcaattcatgggaacaataaaacttctcatggg
aaaacaagatatggtctaaagcgagtctccaagcatcttcccaccaaggaatccccacaa
aattctataaagggaggtgctgctcttcttgcagtttgtcggggaaaggtatcagagggg
attgatttctctgatgaaaatgctagggtagttgtgatcgtcggtattccatttccaaac
ataaatgatgttcaggtaatgctgaagaagaaacataatgatgcatataaagtatcaaaa
aatctcttaagtgggagcgaatggtactgccaccaagcatttcgtgctttgaatcaagct
gcaggccgttgcattcgtcacaggtttgattatggagccataattttattagatgagcga
tataaggaagagcggaatctcgcatacatttcaaagtggataaggaattcaatcaagcaa
taccgcaactttgatgaatcactaaagggattacgagacttttttcaaaatgttgagaga
cagattggcccaaaaagcaaggaagcaacttgtgagaatgcgttgcagacagacttactc
atacctgaaactaacaaggaagtttcatgctcatcaaagcaaagcatctctgaccggggg
ctcccacagaaaaaaaatcagaaagccaagaggctcaatcgtcagaacagaaggaagatg
gttcctcaaaatacagttgcaatagcagagtccagccaattggccaaggattcaagtcct
acaatagtggatgattcccctgtctctcttctaaatgctcaatgcagtagaaaagtcgaa
gcagctggtgagaggaataagaaactattgaacagctccacatcttgtattgattttgaa
aacatcactccggtgtcctccaaatattcagacacaatttctgtagaatcatcagaaaac
attttgcatcagtccctggctatcgaaaacactgtgatagaggctcaaattgccagtccc
agagacacatcggatgataaaagcgcatactcagcagctaatacctgcaaccaatcacta
gatggaccatctttttcactctcgactacaattacaaacgttgcagatactcctgaaaag
ccaccatatgcagatgtcttcaattctgaacaggattcatctttgaatatgagcgtaaat
tcccacagccagaaaagaagacggataatgttttcacaactgagtagctgtacacaaaca
ggccgcttgagctgtcctggtgcagaatacctgtgccaggttgacaagcgtatctttgac
aggtgcaccaaggatggtgctccacaacatgatgtttggtctgaagaagatggttgtgtg
ttcaggacgcttagttgccccttctgcaccgttcccaagactcttggagtgcaagttatg
gcaactgatgcatcaaatgttcatctactgaacaaggttttctttcatgctgaccatgtg
gatatgacacgtgagcaaacaccaaaacaagaggcgacacctgtctgtgctagtgttcct
agccgtggctcttctgtgatcgagatagagagatatgtgtataatcctcagcctaagaat
ttaacaaaagcaaagctcaggctacctaaaagggatcacatctcatcagatcatcaagat
ggagacggcacatga
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integrated database retrieval system
