KEGG   Elaeis guineensis (African oil palm): 105056538
Entry
105056538         CDS       T03921                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105056538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egu03021]
    105056538
Enzymes [BR:egu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     105056538
Transcription machinery [BR:egu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     105056538
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 105056538
NCBI-ProteinID: XP_010937061
UniProt: A0A6I9S4J9
LinkDB
Position
13:21408947..21421533
AA seq 1189 aa
MEVEQSPDGPEPMNVDSPNNGTEDLDMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEF
IEHGIQDLFDSLGEVNVEPGYDPSKKRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENL
KLLPRHARLQNMTYSSQMKVEVRVLVYTQEKSDKAKTGKDAYIVKNVVSDKKKEIAIGRI
PVMIRSKLCWLHTLDKSDCLFDSGGYFLIKGMEKTFIAQEQRHLARVWVTDKPSWAVSYL
SEIKRKRIYIKLVEAPKAEGFSGGKVVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLG
ESSADLINIILATVKNADEHYKKFREDADEHDKNFRRIDKAQDYVNGQVKVSKFPPSESF
DEYVDKFLFPNIYGHRQKALFLGYMVKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARE
LRAHIRHAERRMVKAMQRDLYGDRDLQLIERYLDASIITNGLNRAFSTGAWCHPYKRTER
CSGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGL
VKNLAVTALVSLKVTEPILDKLISCGMEKLDEISLTSVSSMDKVFLNGDWVGVCADSSSF
VARLRCMRRATLIHSQVEIKRDKHQREVRIFSDAGRILRPLLIVENLEKISKLKGGVCSF
QHLMDQGIIELIGVEEEEDCPTAWGIRHLFMGDEGQPAPKYTHCELDVSFLLGLSCGIIP
FANHNFARRVLYQAEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAV
HSLGRKDSMPRPEYFNGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV
ENKELTKRFKLRDKVDFGKMQSKKGKVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHG
IKLKHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQEN
FPFTCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTASVDVITEQ
LHRAGFSRWGSEKVLNGRTGEVMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQP
VADRKRFGGVKFGEMERDCLLAHGAASNLHERLFMLSDFSQMHICQTCRRAANVILRPVV
GGNKIRGPYCNFCQSSENIVKINVPYGAKLLYQELFSMGICLKFDTEVC
NT seq 3570 nt   +upstreamnt  +downstreamnt
atggaagtggaacaatcccccgatggacctgagcctatgaatgttgattctcctaataat
ggcactgaggaccttgatatgaatgttggaagtctggaaaagttttgcaaagaagctgcc
cggtccttttttgctgaatgggggctcattagtcaccagataaattcgtataatgaattt
atagagcatgggattcaagatctgtttgactcccttggtgaagtgaatgtagagcctggg
tatgatccctctaagaaacggggtgctgaatggcgtcatgcaactgtttcatttgggaag
gttaggctagagaagccttcattttggtctgggagggatgacctaccagaggaaaatctc
aaattattgcctagacatgctcgcctccagaatatgacgtactcctctcagatgaaagtg
gaagtgagagtgctggtttatacacaagaaaaaagtgacaaggcaaagaccggcaaagat
gcatatattgttaagaacgtggtgagcgacaaaaagaaggagattgcaatcggaagaatt
cctgttatgattagatcaaagctttgctggctccacacacttgacaaaagtgattgcctt
tttgattctggtggctactttttgatcaaaggaatggagaagacctttattgcacaggaa
cagaggcatttagcaagagtctgggtcactgacaaaccaagctgggcggtatcatattta
tctgaaataaagaggaagagaatctacataaaactcgttgaagctccaaaagctgaaggt
ttcagtggtggaaaggttgtcaacttttttttcttgtatgctacaattccagtttggatt
atgttttttgcccttggtgcatcatctgataaagaagtgtttgagatgattgatcttgga
gaatctagtgccgatttgataaatataattttggcaactgttaaaaatgctgacgagcat
tataagaagttccgtgaggatgctgatgagcatgataagaacttccgcaggattgataag
gctcaggattatgtaaatggtcaggtcaaagtttcaaaatttcctcccagtgaatcattt
gatgaatatgttgataagttcctatttcccaatatctacgggcacaggcagaaggcactg
tttttaggatacatggtgaaatgccttctattggcatgctttgggaaaagaaaatgtgac
aataaggatgatttcagaaacaagagattggacttggctggtgaactgcttgcaagagag
ttgcgtgctcatattaggcatgctgagaggcggatggtgaaggcaatgcagagggattta
tatggggaccgtgacctgcagttgattgaacggtatttagatgcttcgattatcacgaat
ggactgaatagagctttttcaactggtgcatggtgccatccatacaaaaggacggaaagg
tgctcgggcatcgttgcaactcttagaagaacaaatcccctccaaatgatgtctgacttg
agaaagacacgtcaacaggttgcatatgcagggaaggctggagatgctagatatccaaac
ccgtcgtattggggcaagttgtgttttctgtccaccccagacggagaaaattgtggactt
gtgaaaaatttagctgtcactgcacttgtcagcttgaaagtgacagaaccaatattggat
aaattgatctcctgtggtatggagaaattggatgaaatttcattaacatcagtaagcagt
atggataaagtttttctgaatggagactgggttggagtttgtgctgattcaagttcattt
gttgcaagattaagatgcatgcgtcgtgctacactaatccattcacaggtggagatcaag
agggacaagcaccaaagagaagtccgaatattttctgatgcaggaagaattctgaggcca
cttttaatagttgagaatttagagaaaataagcaagcttaaaggaggtgtttgctctttc
caacatcttatggatcagggaatcatagaacttataggtgttgaagaagaagaggattgc
cccacagcatggggaatcaggcacctttttatgggagatgaaggtcaacctgctccaaaa
tacacccactgtgaacttgatgtttcattcttattgggcttaagttgtggcatcatccct
tttgccaaccacaattttgctaggagggttctgtaccaggccgagaagcattctcaacag
gctatcggtttctccacgaccaatccaaacatcagagtggacactctttcccaccaactg
tactatccacagaaaccacttttcagaacagtgatagctgattgccttggtagggctgtc
cattcattgggacgaaaagacagcatgcccagaccagagtacttcaatggtcaaaatgct
attgtggcagtcaatgttcaccaaggatacaaccaggaggattccttggtcatgaatagg
gcttccttagagcgtggaatgttccgtacagaacatttcaggagttacaaagctgaggtt
gagaataaggaacttaccaaacgttttaagctgagggataaggttgactttggcaaaatg
caaagcaaaaaaggaaaagtagacagtctagatgatgatggtttcccatatattggtgct
agtcttcaaagtggtgatattgttattgggaaggttgcagaatctggagaagatcatggc
atcaagctgaaacacacagaaaaagggatggtacaaaaagtagtgctttcagcaaatgat
gaaggcaaaaattttgcagttgttactctgagacaggttcgatctccctgtcttggagat
aaattttccagtatgcatgggcagaagggtgtggttggtttcttggagtctcaggaaaat
tttccattcacctgtcaaggaatagttcctgatattgtgataaatccacatgcttttcct
acaaggcaaactcctggtcagctgcttgaggctgctttgggtaagggaattgcctgtgga
ggttcagtgagatatgctacaccatttaccactgcatcagttgatgttataacggagcag
ctgcacagggctggtttctccagatggggtagtgagaaggttctgaatggccggactggt
gaagtcatgcgctctatgatcttcatgggccccacattttatcagagattaatccatatg
gctgaagacaaggtcaagttcaggaacactgggccagtacacccgctcacaaggcagccg
gtagccgacagaaagaggtttggtggggtgaagtttggagagatggagcgggactgcctg
cttgctcatggggcagcttccaacctacatgagcggctattcatgctcagcgacttctct
cagatgcacatctgtcagacatgcaggcgggctgcgaatgttatcctgcggcctgtggtt
gggggtaacaagattcgtggaccatactgtaatttctgtcagtcctctgaaaacatagtc
aagatcaatgtgccttacggtgcaaagctgctctatcaggagctcttcagcatgggtatt
tgcttgaagtttgatacagaggtctgttaa

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