Egretta garzetta (little egret): 104134033
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Entry
104134033 CDS
T05152
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104134033 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
egz04090
]
104134033 (VCAM1)
04091 Lectins [BR:
egz04091
]
104134033 (VCAM1)
CD molecules [BR:
egz04090
]
Proteins
104134033 (VCAM1)
Lectins [BR:
egz04091
]
I-type lectins (Siglecs)
104134033 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C2-set
Ig_4
DUF2808
Ig_C17orf99
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
104134033
NCBI-ProteinID:
XP_009645828
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAVVVMDGHVTYLEMLAKLQVKAFETELIPADRIAAQIGKTVILTCNSTGCASPRFSWRT
QMDSPLGGTVNNYGTYSTLTMNPVSILNSHAYLCTVFCAKEEKKEKTVKVELYSFPSDPV
IEISPPVAGEPVTITCRIPEVYPSDRLEVLLKKGEDLLHTENFYGDSNTNTENKTVTYSF
NPTAGDTGKEITCVAKLPIDDMDFEPKERVTSQKLNINFGPQNTIITASPGNSPMEGDSV
TLTCVTESNPPAQIVWRKHLADESIQHLIENDVLSIPHARFSDSGLYMCEVINLVTNKTE
KATMDIVIQGAPNITELSIEPSTTVQEGEKVSIQCSAESNPPPKIILRRKSDGADMGPYS
EGRTLLLPSVTFLNGGDYECIAENKFGKRFFVSDGPKNTMISVIPATAVKEGETVTMKCH
SSGNPAPVISWKKKKATGESQKIFQGAVLTIQNVTSQDLGLYECEAYNQFGKEEKAVKLL
VQVPPQNITVLVYPSENVKEGENVTIASSTDSNPSSQMVLKKVHQEKEIILPSANGTFIL
YNATKNDTGRYLLDVFNGVGNNIKVIEIAVAGRLGKPDQMIALIIAFSCVTAIVVPGIAI
LIYVARKAKINGSYSLVKALRLKV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtggtcatggatggacatgtgacttatctggaaatgctagcaaagcttcaa
gttaaagcttttgaaacggagctgatacctgctgacagaattgctgcacagattggaaaa
acagtcatactcacatgcaatagcactggctgtgcatcaccaaggttttcctggagaacc
cagatggacagcccccttggaggaacagtgaacaactatgggacatactctaccttgact
atgaatccagttagcattctgaattctcatgcttacctgtgtactgtcttctgtgctaag
gaagagaaaaaagagaagactgtcaaagttgaactttactctttccccagtgatcctgtc
attgagatcagtccaccagttgctggagaaccagtcacgatcacctgtagaattcctgag
gtgtatccttctgatcgactggaagtactcctgaagaaaggggaagaccttcttcataca
gaaaatttttatggagatagcaacacaaatacagagaacaaaactgtgacatattcattt
aatcctacggctggagatactgggaaagagattacctgtgtggctaaattaccaattgat
gatatggactttgaaccgaaagagagagtaacttctcagaaattgaatataaactttggt
ccacaaaatactatcattactgcatctccaggcaactcgccaatggaaggagactctgta
accctcacttgtgtgactgagagtaatccaccagcacaaatagtttggagaaaacatctg
gctgatgaaagcattcagcatctgatagaaaatgatgtcctttctattccccatgcccgt
ttctctgattcaggactgtacatgtgtgaagtaattaatctggtaactaataaaacagag
aaagcaaccatggacattgttatacaaggtgccccaaacatcacagaactctccattgag
ccttctacaacagttcaagaaggagaaaaagtgtccatacaatgttctgctgagagtaac
cctcctcccaagattattttaaggagaaaatctgacggcgcagacatggggccttacagt
gaggggagaactctcctccttccatctgtgacattcctaaatggaggagactatgaatgt
atagcagaaaataagtttgggaaaagattctttgtttcagatgggccgaagaacacaatg
atctctgttatccctgctactgctgttaaagaaggggaaaccgtgacaatgaaatgtcat
tcttctggtaatccagctccagtgatctcttggaagaaaaaaaaggctactggggagtct
cagaaaatttttcaaggtgcagttttaactatacagaatgtaacaagtcaagatctgggg
ctctatgaatgtgaagcttataaccaatttggcaaagaagaaaaagctgtgaaattactt
gttcaagttcctccacaaaatattactgtgttagtatatccatcagaaaatgtcaaagaa
ggagaaaatgtcactattgcatctagcacagacagtaacccatcatcacagatggtcctg
aaaaaagtccatcaggagaaagaaattattctgccatcagcgaacggaacctttatactc
tacaatgccaccaaaaatgatacaggcagatatttgcttgatgttttcaatggggttgga
aacaacatcaaagtgattgagatagctgttgcaggaagactgggaaaaccagatcaaatg
atagcactgattattgcgttttcctgtgtaacagcaatagtagtacctggaattgcaatt
ttgatctacgtggcaagaaaagcaaagataaatggatcctacagtcttgtaaaagcactc
aggctgaaagtgtga
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